RNA–Protein interactions for RNA: ENSMUST00000047511.13

Shtn1-201, Transcript of Shootin-1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shtn1, Length 4,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-201ENSMUST00000047511 Gm3264L7N2C5 238 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Mxd1P50538 227 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Adamts19P59509 1210 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Krt2Q3TTY5 707 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Lrrc47Q505F5 581 aaKnown RBP12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Q8BP99 230 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Smad3Q8BUN5 425 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Clic5Q8BXK9 251 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 AA792892Q8C6S1 278 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Rdh13Q8CEE7 334 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Dennd1cQ8CFK6 786 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Slc35c2Q8VCX2 364 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Vps11Q91W86 941 aaKnown RBP12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Lysmd3Q99LE3 305 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Katnbl1Q9CWJ3 299 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Vmn2r25W4VSP2 855 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Gm44511A0A0N4SW10 223 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Gm13941A2AJ38 245 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Slc4a11A2AJN7 862 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 4931406B18RikA2RSL7 367 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 9230113P08RikD3YWX3 137 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Trim30bE9PVL6 203 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Klhl33G3UW92 533 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 ChkaO54804 453 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Acsl1P41216 699 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Tff2Q03404 129 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Kcnk9Q3LS21 402 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Nt5dc3Q3UHB1 546 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 HnrnpdQ60668 355 aaKnown RBP12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 HiraQ61666 1015 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Zrsr1Q64707 428 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Fnip1Q68FD7 1165 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Krt73Q6NXH9 539 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Tecpr1Q80VP0 1166 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Tubgcp5Q8BKN5 1024 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Gtf3c4Q8BMQ2 817 aaKnown RBP12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Nipal4Q8BZF2 406 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Snx30Q8CE50 437 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 LipmQ8K2A6 422 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Cybrd1Q925G2 290 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Q9CPS8 106 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Decr1Q9CQ62 335 aaKnown RBP12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Kctd4Q9D7X1 259 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Lrrc34Q9DAM1 415 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Pak1ip1Q9DCE5 382 aaKnown RBP12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Il21rQ9JHX3 529 aa12.06□□□□□ -0.48
Shtn1-201ENSMUST00000047511 PappaQ8R4K8 1624 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 ZxdbA2CE44 873 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Gm10720D3Z1I5 223 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Fdft1P53798 416 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 DselQ0VBN2 1207 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Pcgf5Q3UK78 256 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Zfp560Q3URI6 754 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Def8Q99J78 448 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Reep3Q99KK1 254 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Zfp655Q9CZP3 541 aaKnown RBP12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Exoc2Q9D4H1 924 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Fip1l1Q9D824 581 aaKnown RBP12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 B4galt4Q9JJ04 344 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 DazlQ64368 298 aaKnown RBP12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Znf280cQ6P3Y5 742 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Fbxl21Q8BFZ4 434 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 ClmnQ8C5W0 1052 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Lrrc42Q8R2U7 421 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Fbxo21Q8VDH1 627 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 AslQ91YI0 464 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 DarsQ922B2 501 aaKnown RBP12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Mrpl1Q99N96 336 aaKnown RBP12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 CenpsQ9D084 142 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Fam3aQ9D8T0 230 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Fundc1Q9DB70 155 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 PllpQ9DCU2 182 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Bace2Q9JL18 514 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 RecqlQ9Z129 648 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Sned1Q70E20 1403 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Yme1l1O88967 715 aaKnown RBP12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 UmpsP13439 481 aaKnown RBP12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Zfp280bQ505F4 534 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 MlipQ5FW52 269 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Sh3gl2Q62420 352 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Olfr301Q7TS04 311 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Fam151aQ8QZW3 608 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 HnrnprQ8VHM5 632 aaKnown RBP12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Smim11aQ99J19 55 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Rec114Q9CWH4 259 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 ArskQ9D2L1 553 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Elf4Q9Z2U4 655 aa12.05□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Skint6A7XUZ6 1240 aa12.04□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Catsperg2C6KI89 1145 aa12.04□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Vmn1r39G3UWE6 305 aa12.04□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Calhm3J3QMI4 347 aa12.04□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Gm6408J3QNG1 320 aa12.04□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Vmn2r67K7N6T2 851 aa12.04□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Tbxas1P36423 533 aa12.04□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Nat1P50294 290 aa12.04□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Ntrk1Q3UFB7 799 aa12.04□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Gm136Q3V037 328 aa12.04□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Ntan1Q64311 310 aa12.04□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Zc4h2Q68FG0 224 aa12.04□□□□□ -0.48
Shtn1-201ENSMUST00000047511 Ggnbp1Q6K1E7 370 aa12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 396.5 ms