RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 LGALS2P05162 132 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 HSP90AA1P07900 732 aaKnown RBP5.93□□□□□ -1.46
SF3B3-214ENST00000572365 MYL4P12829 197 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 BTF3P20290 206 aaKnown RBP5.93□□□□□ -1.46
SF3B3-214ENST00000572365 HOXA5P20719 270 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 ACVR2AP27037 513 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 MARK3P27448 753 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 HOXC13P31276 330 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 MTHFRP42898 656 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 HSD11B2P80365 405 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 ARHGAP8P85298 464 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 SRSF5Q13243 272 aaKnown RBP5.93□□□□□ -1.46
SF3B3-214ENST00000572365 TRIM14Q14142 442 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 STARD3Q14849 445 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 NPY5RQ15761 445 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 PLA1AQ53H76 456 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 FBXO47Q5MNV8 452 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 PGBD2Q6P3X8 592 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 SLC44A3Q8N4M1 653 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 NKAPQ8N5F7 415 aaKnown RBP5.93□□□□□ -1.46
SF3B3-214ENST00000572365 TMEM57Q8N5G2 664 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 PPP1R9BQ96SB3 815 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 ADOQ96SZ5 270 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 SEC62Q99442 399 aaKnown RBP5.93□□□□□ -1.46
SF3B3-214ENST00000572365 ZSWIM1Q9BR11 485 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 RPP25Q9BUL9 199 aaKnown RBP5.93□□□□□ -1.46
SF3B3-214ENST00000572365 TEX101Q9BY14 249 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 TTYH3Q9C0H2 523 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 MLXIPQ9HAP2 919 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 RXFP3Q9NSD7 469 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 AURKAIP1Q9NWT8 199 aaPredicted RBP5.93□□□□□ -1.46
SF3B3-214ENST00000572365 KCNE5Q9UJ90 142 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 CNOT11Q9UKZ1 510 aaKnown RBP5.93□□□□□ -1.46
SF3B3-214ENST00000572365 DUSP12Q9UNI6 340 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 SHOC2Q9UQ13 582 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 GINS2Q9Y248 185 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.93□□□□□ -1.46
SF3B3-214ENST00000572365 PCDHB7Q9Y5E2 793 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 RAD54BQ9Y620 910 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 ZBED9Q6R2W3 1325 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 PATJQ8NI35 1801 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 DENND4AQ7Z401 1863 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 COL12A1Q99715 3063 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 A0A087WZ62 844 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 A0A1W2PS29 197 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 GAGE12BA1L429 117 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 GAGE12HA6NDE8 117 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 SRRM3A6NNA2 597 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-214ENST00000572365 MARCH11A6NNE9 402 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 SLC30A4O14863 429 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 FFAR2O15552 330 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 RANBP6O60518 1105 aaKnown RBP5.92□□□□□ -1.46
SF3B3-214ENST00000572365 CFIP05156 583 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 ELANEP08246 267 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 SRGAP2BP0DMP2 458 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 SCG2P13521 617 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 HOXB8P17481 243 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-214ENST00000572365 ACRV1P26436 265 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 HOXA13P31271 388 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-214ENST00000572365 SELENOPP49908 381 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 ANXA11P50995 505 aaKnown RBP5.92□□□□□ -1.46
SF3B3-214ENST00000572365 ZNF134P52741 427 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 LOXL3P58215 753 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 MGAT3Q09327 533 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 TOB2Q14106 344 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-214ENST00000572365 SLC29A2Q14542 456 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 PTPN14Q15678 1187 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 INSCQ1MX18 579 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 C4orf46Q504U0 113 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 SBK1Q52WX2 424 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 L1TD1Q5T7N2 865 aaKnown RBP5.92□□□□□ -1.46
SF3B3-214ENST00000572365 FCRL6Q6DN72 434 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 FOXR2Q6PJQ5 311 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-214ENST00000572365 TTC9BQ8N6N2 239 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 ZNF527Q8NB42 609 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 TRAPPC12Q8WVT3 735 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 MRPS27Q92552 414 aaKnown RBP5.92□□□□□ -1.46
SF3B3-214ENST00000572365 CASP10Q92851 521 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 MAP7D2Q96T17 732 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 CDCA3Q99618 268 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-214ENST00000572365 SLC46A2Q9BY10 475 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 MAGEB5Q9BZ81 275 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 CWH43Q9H720 699 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 TM7SF3Q9NS93 570 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 TBC1D23Q9NUY8 699 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 ZSCAN32Q9NX65 697 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 TRPM5Q9NZQ8 1165 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 ARPP21Q9UBL0 812 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-214ENST00000572365 PADI3Q9ULW8 664 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 TBC1D30Q9Y2I9 924 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 TCAF1Q9Y4C2 921 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 SPAG17Q6Q759 2223 aa5.92□□□□□ -1.46
SF3B3-214ENST00000572365 PRAMEF33A0A0G2JMD5 474 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 GOLGA6L3A6NEY3 463 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 TSPY2A6NKD2 308 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 B4DLN1 442 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 PIP5K1CO60331 668 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 PRAMEF10O60809 474 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 SCAF4O95104 1147 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms