RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 NACA2Q9H009 215 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 ABCB8Q9NUT2 735 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 PLK2Q9NYY3 685 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 IGSF9Q9P2J2 1179 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 EFCAB8A8MWE9 144 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 NEDD8-MDP1E9PL57 170 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 ATP9BO43861 1147 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SNAP91O60641 907 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SUN1O94901 812 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 MT-CO1P00395 513 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 MYBL2P10244 700 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 RBP3P10745 1247 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 PSMA3P25788 255 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 RPL21P46778 160 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SKOR1P84550 965 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 GAD2Q05329 585 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SLC10A7Q0GE19 358 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 POLD3Q15054 466 aaPredicted RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 RNF219Q5W0B1 726 aaPredicted RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 HIBCHQ6NVY1 386 aaPredicted RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 RWDD4Q6NW29 188 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 LRRC31Q6UY01 552 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 PRPF39Q86UA1 669 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 ATL2Q8NHH9 583 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 TFB1MQ8WVM0 346 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 HTR3CQ8WXA8 447 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 OXNAD1Q96HP4 312 aaPredicted RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 TEKT5Q96M29 485 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 KRT12Q99456 494 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 EPC1Q9H2F5 836 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 PCDH9Q9HC56 1237 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 HOMER3Q9NSC5 361 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 TARSL2A2RTX5 802 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 TRAFD1O14545 582 aaPredicted RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SMAD6O43541 496 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 FZD6O60353 706 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 NFATC1O95644 943 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SRCP12931 536 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 HNRNPLP14866 589 aaKnown RBP eCLIP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SERPINB6P35237 376 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SOX9P48436 509 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SERPINH1P50454 418 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SEMA5AQ13591 1074 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 CCINQ13939 588 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 DMC1Q14565 340 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 PDK1Q15118 436 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 GLE1Q53GS7 698 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 INO80DQ53TQ3 878 aaPredicted RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 DGKKQ5KSL6 1271 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 C6orf118Q5T5N4 469 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 DENND5AQ6IQ26 1287 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 PLPP6Q8IY26 295 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SH2D3CQ8N5H7 860 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 MYRIPQ8NFW9 859 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 CASKIN2Q8WXE0 1202 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 ART4Q93070 314 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 GBA3Q9H227 469 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 CHRDQ9H2X0 955 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 HEY1Q9Y5J3 304 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 LAMA1P25391 3075 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 WASH3PC4AMC7 463 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 K7ERQ8 282 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 RAMP2O60895 175 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SLU7O95391 586 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 C1QAP02745 245 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 ASGR2P07307 311 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SRFP11831 508 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 GBP2P32456 591 aaPredicted RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 CSNK1DP48730 415 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 MRPS25P82663 173 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 GUCY2DQ02846 1103 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SNX1Q13596 522 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 RFTN1Q14699 578 aaPredicted RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 TEX44Q53QW1 395 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 ANKRD20A2Q5SQ80 823 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 ANKRD20A1Q5TYW2 823 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 ANKRD20A3Q5VUR7 823 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 ANKRD22Q5VYY1 191 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SYDE1Q6ZW31 735 aaPredicted RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 ZC3H18Q86VM9 953 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 MFN1Q8IWA4 741 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 PLCD3Q8N3E9 789 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 KDM1BQ8NB78 822 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 CPT1BQ92523 772 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 RUBCNQ92622 972 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 ISG20Q96AZ6 181 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 IMP4Q96G21 291 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 SPATA13Q96N96 652 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 TRMT61BQ9BVS5 477 aaKnown RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 BBS2Q9BXC9 721 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 EPB41L4BQ9H329 900 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 KIAA1522Q9P206 1035 aaPredicted RBP6.89□□□□□ -1.31
LINC00517-202ENST00000554257 LIMD1Q9UGP4 676 aa6.89□□□□□ -1.31
LINC00517-202ENST00000554257 TSPAN11A1L157 253 aa6.88□□□□□ -1.31
LINC00517-202ENST00000554257 KRBA1A5PL33 1030 aa6.88□□□□□ -1.31
LINC00517-202ENST00000554257 FAM187AA6NFU0 413 aa6.88□□□□□ -1.31
LINC00517-202ENST00000554257 ZBTB24O43167 697 aaPredicted RBP6.88□□□□□ -1.31
LINC00517-202ENST00000554257 SPINT1O43278 529 aa6.88□□□□□ -1.31
LINC00517-202ENST00000554257 TMEM63AO94886 807 aa6.88□□□□□ -1.31
LINC00517-202ENST00000554257 ADH1CP00326 375 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms