RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 SREK1Q8WXA9 508 aaKnown RBP11.7□□□□□ -0.54
DDB1-224ENST00000545894 DGCR14Q96DF8 476 aaKnown RBP11.7□□□□□ -0.54
DDB1-224ENST00000545894 LENG8Q96PV6 779 aaPredicted RBP11.7□□□□□ -0.54
DDB1-224ENST00000545894 OXCT2Q9BYC2 517 aaPredicted RBP11.7□□□□□ -0.54
DDB1-224ENST00000545894 ATXN10Q9UBB4 475 aa11.7□□□□□ -0.54
DDB1-224ENST00000545894 USP3Q9Y6I4 520 aa11.7□□□□□ -0.54
DDB1-224ENST00000545894 RPS6KL1Q9Y6S9 549 aa11.7□□□□□ -0.54
DDB1-224ENST00000545894 KPNA7A9QM74 516 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 FBXO21O94952 628 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 OR6B1O95007 311 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 PGM3O95394 542 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 CHRNA1P02708 482 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 CKBP12277 381 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 GOT1P17174 413 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 SPRP35270 261 aaPredicted RBP11.69□□□□□ -0.54
DDB1-224ENST00000545894 ARL4AP40617 200 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 RPL5P46777 297 aaKnown RBP11.69□□□□□ -0.54
DDB1-224ENST00000545894 NUMBP49757 651 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 MRPS6P82932 125 aaKnown RBP11.69□□□□□ -0.54
DDB1-224ENST00000545894 MGAT3Q09327 533 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 AMHR2Q16671 573 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 RARS2Q5T160 578 aaKnown RBP11.69□□□□□ -0.54
DDB1-224ENST00000545894 ZNF618Q5T7W0 954 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 CES3Q6UWW8 571 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 NAPRTQ6XQN6 538 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 SLC26A9Q7LBE3 791 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 TDRD5Q8NAT2 981 aaKnown RBP11.69□□□□□ -0.54
DDB1-224ENST00000545894 PGBD4Q96DM1 585 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 CPB2Q96IY4 423 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 PRICKLE1Q96MT3 831 aaPredicted RBP11.69□□□□□ -0.54
DDB1-224ENST00000545894 RBBP8Q99708 897 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 FERMT1Q9BQL6 677 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 MRPL45Q9BRJ2 306 aaKnown RBP11.69□□□□□ -0.54
DDB1-224ENST00000545894 TCF7L2Q9NQB0 619 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 CLIC5Q9NZA1 410 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 MKI67P46013 3256 aaKnown RBP11.69□□□□□ -0.54
DDB1-224ENST00000545894 A0A087WZ62 844 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 G3V2L1 256 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 AIM2O14862 343 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 H2AFYO75367 372 aaKnown RBP11.69□□□□□ -0.54
DDB1-224ENST00000545894 CLTBP09497 229 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 CTSHP09668 335 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 PSMB4P28070 264 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 PMLP29590 882 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 NUDT2P50583 147 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 CNGA3Q16281 694 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.69□□□□□ -0.54
DDB1-224ENST00000545894 ARMC3Q5W041 872 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 TRAF7Q6Q0C0 670 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 TMEM126BQ8IUX1 230 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 PLD6Q8N2A8 252 aaKnown RBP11.69□□□□□ -0.54
DDB1-224ENST00000545894 FAM81AQ8TBF8 368 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 MAPK15Q8TD08 544 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 CLEC4CQ8WTT0 213 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 NMD3Q96D46 503 aaKnown RBP11.69□□□□□ -0.54
DDB1-224ENST00000545894 P2RY11Q96G91 374 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 HIC2Q96JB3 615 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 LRGUKQ96M69 825 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 OR52B2Q96RD2 323 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 FDXACB1Q9BRP7 624 aaPredicted RBP11.69□□□□□ -0.54
DDB1-224ENST00000545894 TMEM39AQ9NV64 488 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 PTTG2Q9NZH5 202 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 TBX21Q9UL17 535 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 RAB26Q9ULW5 256 aa11.69□□□□□ -0.54
DDB1-224ENST00000545894 KIAA0100Q14667 2235 aaKnown RBP11.68□□□□□ -0.54
DDB1-224ENST00000545894 RGSL1A5PLK6 1076 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 TRIM43BA6NCK2 446 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 MFSD11O43934 449 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 TRIM13O60858 407 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 DNAJA2O60884 412 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 CLPTM1O96005 669 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 PENKP01210 267 aaPredicted RBP11.68□□□□□ -0.54
DDB1-224ENST00000545894 MPOP05164 745 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 SPATA31D3P0C874 917 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 PIK3R1P27986 724 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 SERPINB5P36952 375 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 GLUD2P49448 558 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 LIMK2P53671 638 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 POU5F1BQ06416 359 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 PABPC1LQ4VXU2 614 aaKnown RBP11.68□□□□□ -0.54
DDB1-224ENST00000545894 FAM26DQ5JW98 314 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 ZFP1Q6P2D0 407 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 SPATA31D4Q6ZUB0 917 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 NT5DC4Q86YG4 428 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 PYROXD2Q8N2H3 581 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 KYQ8NBH2 561 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 CATSPER1Q8NEC5 780 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 NLRP7Q8WX94 980 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 TRIM43Q96BQ3 446 aaPredicted RBP11.68□□□□□ -0.54
DDB1-224ENST00000545894 MPP4Q96JB8 637 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 CNDP1Q96KN2 507 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 CEP41Q9BYV8 373 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 OCEL1Q9H607 264 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 PRDM16Q9HAZ2 1276 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 RCOR3Q9P2K3 495 aaPredicted RBP11.68□□□□□ -0.54
DDB1-224ENST00000545894 BCAP29Q9UHQ4 241 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 TMCO1Q9UM00 188 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 GINS2Q9Y248 185 aa11.68□□□□□ -0.54
DDB1-224ENST00000545894 TRPV2Q9Y5S1 764 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms