RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 SMC1BQ8NDV3 1235 aa15.05■□□□□ -0
DDX55-209ENST00000542286 IPMKQ8NFU5 416 aa15.05■□□□□ -0
DDX55-209ENST00000542286 THTPAQ9BU02 230 aa15.05■□□□□ -0
DDX55-209ENST00000542286 FTHL17Q9BXU8 183 aa15.05■□□□□ -0
DDX55-209ENST00000542286 CNGB3Q9NQW8 809 aa15.05■□□□□ -0
DDX55-209ENST00000542286 KCNK4Q9NYG8 393 aa15.05■□□□□ -0
DDX55-209ENST00000542286 IGSF9Q9P2J2 1179 aa15.05■□□□□ -0
DDX55-209ENST00000542286 ZNF212Q9UDV6 495 aa15.05■□□□□ -0
DDX55-209ENST00000542286 SLC39A10Q9ULF5 831 aa15.05■□□□□ -0
DDX55-209ENST00000542286 PHF24Q9UPV7 400 aa15.05■□□□□ -0
DDX55-209ENST00000542286 SCN4AP35499 1836 aa15.04■□□□□ -0
DDX55-209ENST00000542286 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.04■□□□□ -0
DDX55-209ENST00000542286 MLNP12872 115 aa15.04■□□□□ -0
DDX55-209ENST00000542286 CHRNA4P43681 627 aa15.04■□□□□ -0
DDX55-209ENST00000542286 PPIDQ08752 370 aaKnown RBP15.04■□□□□ -0
DDX55-209ENST00000542286 PCBP1Q15365 356 aaKnown RBP eCLIP15.04■□□□□ -0
DDX55-209ENST00000542286 RAB41Q5JT25 222 aa15.04■□□□□ -0
DDX55-209ENST00000542286 C4orf22Q6V702 233 aa15.04■□□□□ -0
DDX55-209ENST00000542286 DENND6AQ8IWF6 608 aa15.04■□□□□ -0
DDX55-209ENST00000542286 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.04■□□□□ -0
DDX55-209ENST00000542286 SMARCD1Q96GM5 515 aa15.04■□□□□ -0
DDX55-209ENST00000542286 B3GALT6Q96L58 329 aa15.04■□□□□ -0
DDX55-209ENST00000542286 NR1H4Q96RI1 486 aaPredicted RBP15.04■□□□□ -0
DDX55-209ENST00000542286 ADAM2Q99965 735 aa15.04■□□□□ -0
DDX55-209ENST00000542286 ATXN10Q9UBB4 475 aa15.04■□□□□ -0
DDX55-209ENST00000542286 SLC2A6Q9UGQ3 507 aa15.04■□□□□ -0
DDX55-209ENST00000542286 GOLGA8QA0A0J9YX86 632 aa15.04■□□□□ -0
DDX55-209ENST00000542286 GOLGA8OA6NCC3 632 aa15.04■□□□□ -0
DDX55-209ENST00000542286 GOLGA8NF8WBI6 632 aa15.04■□□□□ -0
DDX55-209ENST00000542286 TK2O00142 265 aa15.04■□□□□ -0
DDX55-209ENST00000542286 AKR1A1P14550 325 aa15.04■□□□□ -0
DDX55-209ENST00000542286 HOXC8P31273 242 aa15.04■□□□□ -0
DDX55-209ENST00000542286 LHX1P48742 406 aa15.04■□□□□ -0
DDX55-209ENST00000542286 CTBP1Q13363 440 aa15.04■□□□□ -0
DDX55-209ENST00000542286 RALGPS1Q5JS13 557 aa15.04■□□□□ -0
DDX55-209ENST00000542286 SCN4BQ8IWT1 228 aa15.04■□□□□ -0
DDX55-209ENST00000542286 CASP10Q92851 521 aa15.04■□□□□ -0
DDX55-209ENST00000542286 TUBGCP5Q96RT8 1024 aa15.04■□□□□ -0
DDX55-209ENST00000542286 KATNAL1Q9BW62 490 aa15.04■□□□□ -0
DDX55-209ENST00000542286 THAP1Q9NVV9 213 aa15.04■□□□□ -0
DDX55-209ENST00000542286 BFARQ9NZS9 450 aa15.04■□□□□ -0
DDX55-209ENST00000542286 TRPM7Q96QT4 1865 aa15.04■□□□□ -0
DDX55-209ENST00000542286 A0A096LPK6 155 aa15.03■□□□□ -0
DDX55-209ENST00000542286 SOAT2O75908 522 aa15.03■□□□□ -0
DDX55-209ENST00000542286 GP5P40197 560 aa15.03■□□□□ -0
DDX55-209ENST00000542286 TUBB3Q13509 450 aa15.03■□□□□ -0
DDX55-209ENST00000542286 TAF2Q6P1X5 1199 aa15.03■□□□□ -0
DDX55-209ENST00000542286 C14orf80Q86SX3 495 aa15.03■□□□□ -0
DDX55-209ENST00000542286 KCNMB4Q86W47 210 aa15.03■□□□□ -0
DDX55-209ENST00000542286 ZNF781Q8N8C0 355 aa15.03■□□□□ -0
DDX55-209ENST00000542286 NCSTNQ92542 709 aa15.03■□□□□ -0
DDX55-209ENST00000542286 BRD8Q9H0E9 1235 aa15.03■□□□□ -0
DDX55-209ENST00000542286 NMUR1Q9HB89 426 aa15.03■□□□□ -0
DDX55-209ENST00000542286 CYP4F11Q9HBI6 524 aa15.03■□□□□ -0
DDX55-209ENST00000542286 COPG2Q9UBF2 871 aa15.03■□□□□ -0
DDX55-209ENST00000542286 CCL22O00626 93 aa15.03■□□□□ -0
DDX55-209ENST00000542286 GLRA3O75311 464 aa15.03■□□□□ -0
DDX55-209ENST00000542286 PMPCBO75439 489 aa15.03■□□□□ -0
DDX55-209ENST00000542286 CHRNGP07510 517 aa15.03■□□□□ -0
DDX55-209ENST00000542286 ETS2P15036 469 aa15.03■□□□□ -0
DDX55-209ENST00000542286 SCNN1BP51168 640 aa15.03■□□□□ -0
DDX55-209ENST00000542286 MPP1Q00013 466 aa15.03■□□□□ -0
DDX55-209ENST00000542286 GRM3Q14832 879 aa15.03■□□□□ -0
DDX55-209ENST00000542286 PCSK7Q16549 785 aa15.03■□□□□ -0
DDX55-209ENST00000542286 LIN52Q52LA3 116 aa15.03■□□□□ -0
DDX55-209ENST00000542286 KCTD11Q693B1 232 aa15.03■□□□□ -0
DDX55-209ENST00000542286 TIFABQ6ZNK6 161 aa15.03■□□□□ -0
DDX55-209ENST00000542286 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.03■□□□□ -0
DDX55-209ENST00000542286 ZSCAN18Q8TBC5 510 aaPredicted RBP15.03■□□□□ -0
DDX55-209ENST00000542286 PIWIL2Q8TC59 973 aaKnown RBP15.03■□□□□ -0
DDX55-209ENST00000542286 MAPK15Q8TD08 544 aa15.03■□□□□ -0
DDX55-209ENST00000542286 RBBP8Q99708 897 aa15.03■□□□□ -0
DDX55-209ENST00000542286 CCDC106Q9BWC9 280 aa15.03■□□□□ -0
DDX55-209ENST00000542286 WWP1Q9H0M0 922 aa15.03■□□□□ -0
DDX55-209ENST00000542286 LRRC40Q9H9A6 602 aa15.03■□□□□ -0
DDX55-209ENST00000542286 PREBQ9HCU5 417 aa15.03■□□□□ -0
DDX55-209ENST00000542286 EIF2B3Q9NR50 452 aaKnown RBP15.03■□□□□ -0
DDX55-209ENST00000542286 AURKAO14965 403 aa15.02■□□□□ -0
DDX55-209ENST00000542286 RALBP11234 206 aa15.02■□□□□ -0
DDX55-209ENST00000542286 ARSAP15289 507 aa15.02■□□□□ -0
DDX55-209ENST00000542286 NCF2P19878 526 aaPredicted RBP15.02■□□□□ -0
DDX55-209ENST00000542286 CXCR3P49682 368 aa15.02■□□□□ -0
DDX55-209ENST00000542286 TFAP2DQ7Z6R9 452 aa15.02■□□□□ -0
DDX55-209ENST00000542286 ZNF280BQ86YH2 543 aa15.02■□□□□ -0
DDX55-209ENST00000542286 PHTF2Q8N3S3 785 aa15.02■□□□□ -0
DDX55-209ENST00000542286 TUBB6Q9BUF5 446 aa15.02■□□□□ -0
DDX55-209ENST00000542286 GBA3Q9H227 469 aa15.02■□□□□ -0
DDX55-209ENST00000542286 SLC38A7Q9NVC3 462 aa15.02■□□□□ -0
DDX55-209ENST00000542286 OSER1Q9NX31 292 aa15.02■□□□□ -0
DDX55-209ENST00000542286 GALNT8Q9NY28 637 aa15.02■□□□□ -0
DDX55-209ENST00000542286 CDH9Q9ULB4 789 aa15.02■□□□□ -0
DDX55-209ENST00000542286 MTF2Q9Y483 593 aaPredicted RBP15.02■□□□□ -0
DDX55-209ENST00000542286 SLC4A7Q9Y6M7 1214 aa15.02■□□□□ -0
DDX55-209ENST00000542286 C9IYK1 514 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 E9PBE3 544 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 NEMP1O14524 444 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 KLHL41O60662 606 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 USP1O94782 785 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 C2P06681 752 aa15.02□□□□□ -0.01
DDX55-209ENST00000542286 ASGR1P07306 291 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms