RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PCDH19Q8TAB3 1148 aa19.85■□□□□ 0.77
DDX55-207ENST00000540763 FRS2Q8WU20 508 aa19.85■□□□□ 0.77
DDX55-207ENST00000540763 HMCESQ96FZ2 354 aa19.85■□□□□ 0.77
DDX55-207ENST00000540763 CEP44Q9C0F1 390 aa19.85■□□□□ 0.77
DDX55-207ENST00000540763 KLHL11Q9NVR0 708 aa19.85■□□□□ 0.77
DDX55-207ENST00000540763 SLCO3A1Q9UIG8 710 aa19.85■□□□□ 0.77
DDX55-207ENST00000540763 PPP2R2CQ9Y2T4 447 aa19.85■□□□□ 0.77
DDX55-207ENST00000540763 RAD54BQ9Y620 910 aa19.85■□□□□ 0.77
DDX55-207ENST00000540763 SHROOM3Q8TF72 1996 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 SPTBN4Q9H254 2564 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 MIF4GDA9UHW6 222 aaKnown RBP19.84■□□□□ 0.77
DDX55-207ENST00000540763 PALMO75781 387 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 HLA-EP13747 358 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 GLDCP23378 1020 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 MMRN1Q13201 1228 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 TAZQ16635 292 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 ZC3H14Q6PJT7 736 aaKnown RBP19.84■□□□□ 0.77
DDX55-207ENST00000540763 TSSK4Q6SA08 328 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 ASCL5Q7RTU5 278 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 LRRC49Q8IUZ0 686 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 MDGA1Q8NFP4 955 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 OR2T3Q8NH03 318 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 EXD1Q8NHP7 514 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 ISG20Q96AZ6 181 aaKnown RBP19.84■□□□□ 0.77
DDX55-207ENST00000540763 RBM41Q96IZ5 413 aaKnown RBP19.84■□□□□ 0.77
DDX55-207ENST00000540763 RNF157Q96PX1 679 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 KCNF1Q9H3M0 494 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 PRSS16Q9NQE7 514 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 POLR3BQ9NW08 1133 aaPredicted RBP19.84■□□□□ 0.77
DDX55-207ENST00000540763 AMFRQ9UKV5 643 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 GUCA1BQ9UMX6 200 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 PCDHA3Q9Y5H8 950 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 CAPN6Q9Y6Q1 641 aa19.84■□□□□ 0.77
DDX55-207ENST00000540763 PRR23AA6NEV1 266 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 TTC34A8MYJ7 566 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 AXIN1O15169 862 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 ALOX15BO15296 676 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 GABRG2P18507 467 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 CNR2P34972 360 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 COPAP53621 1224 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 ELAVL3Q14576 367 aaKnown RBP19.83■□□□□ 0.77
DDX55-207ENST00000540763 INO80DQ53TQ3 878 aaPredicted RBP19.83■□□□□ 0.77
DDX55-207ENST00000540763 NCBP2-AS2Q69YL0 99 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 ANO7Q6IWH7 933 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 PEX26Q7Z412 305 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 PLPP6Q8IY26 295 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 PCDH20Q8N6Y1 951 aaKnown RBP19.83■□□□□ 0.77
DDX55-207ENST00000540763 ATP11CQ8NB49 1132 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 PTPRN2Q92932 1015 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 CCDC114Q96M63 670 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 SLC39A8Q9C0K1 460 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 PDFQ9HBH1 243 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 ETNK2Q9NVF9 386 aa19.83■□□□□ 0.77
DDX55-207ENST00000540763 MYO15AQ9UKN7 3530 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 PRAMEF11O60813 436 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 LILRB5O75023 590 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 ZRANB2O95218 330 aaKnown RBP eCLIP19.82■□□□□ 0.76
DDX55-207ENST00000540763 CD160O95971 181 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 ZFXP17010 805 aaPredicted RBP19.82■□□□□ 0.76
DDX55-207ENST00000540763 NDUFV2P19404 249 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 PAPOLAP51003 745 aaKnown RBP19.82■□□□□ 0.76
DDX55-207ENST00000540763 COPS2P61201 443 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 ZBTB16Q05516 673 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 DLG2Q15700 870 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 PPP2R5EQ16537 467 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 C9orf64Q5T6V5 341 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 SLC9A4Q6AI14 798 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 C22orf39Q6P5X5 142 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 ZNF354CQ86Y25 554 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 RCOR2Q8IZ40 523 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 PQLC3Q8N755 202 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 ZNF366Q8N895 744 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 HMGB4Q8WW32 186 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 KRT35Q92764 455 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 CELF6Q96J87 481 aaKnown RBP19.82■□□□□ 0.76
DDX55-207ENST00000540763 MRGPRX1Q96LB2 322 aa19.82■□□□□ 0.76
DDX55-207ENST00000540763 SIN3BO75182 1162 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 MT-CO1P00395 513 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 TNNT1P13805 278 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 CDKN2BP42772 138 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 NUMBP49757 651 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 IL10RBQ08334 325 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 TFDP3Q5H9I0 405 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 MFSD7Q6UXD7 560 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 LINGO4Q6UY18 593 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.81■□□□□ 0.76
DDX55-207ENST00000540763 NKD2Q969F2 451 aaPredicted RBP19.81■□□□□ 0.76
DDX55-207ENST00000540763 ZNF599Q96NL3 588 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 ALS2CR12Q96Q35 445 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 MKRN2Q9H000 416 aaKnown RBP19.81■□□□□ 0.76
DDX55-207ENST00000540763 RSPH9Q9H1X1 276 aaPredicted RBP19.81■□□□□ 0.76
DDX55-207ENST00000540763 BCCIPQ9P287 314 aaKnown RBP eCLIP19.81■□□□□ 0.76
DDX55-207ENST00000540763 SCML1Q9UN30 329 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 EFR3BQ9Y2G0 817 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 MFHAS1Q9Y4C4 1052 aa19.81■□□□□ 0.76
DDX55-207ENST00000540763 DFFAO00273 331 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 APOL1O14791 398 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 ZSCAN12O43309 604 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 MFSD11O43934 449 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 RNASEH1O60930 286 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms