RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ZFR2Q9UPR6 939 aaKnown RBP17.96■□□□□ 0.47
PVT1-220ENST00000524165 TULP2O00295 520 aa17.95■□□□□ 0.46
PVT1-220ENST00000524165 ATP9BO43861 1147 aa17.95■□□□□ 0.46
PVT1-220ENST00000524165 ZNF18P17022 549 aa17.95■□□□□ 0.46
PVT1-220ENST00000524165 RABIFP47224 123 aa17.95■□□□□ 0.46
PVT1-220ENST00000524165 TMEM259Q4ZIN3 620 aa17.95■□□□□ 0.46
PVT1-220ENST00000524165 TTC39CQ8N584 583 aa17.95■□□□□ 0.46
PVT1-220ENST00000524165 SLC4A11Q8NBS3 891 aa17.95■□□□□ 0.46
PVT1-220ENST00000524165 ERCC4Q92889 916 aaPredicted RBP17.95■□□□□ 0.46
PVT1-220ENST00000524165 TMEM159Q96B96 161 aa17.95■□□□□ 0.46
PVT1-220ENST00000524165 NUCKS1Q9H1E3 243 aaKnown RBP17.95■□□□□ 0.46
PVT1-220ENST00000524165 CNGB3Q9NQW8 809 aa17.95■□□□□ 0.46
PVT1-220ENST00000524165 DMAC2Q9NW81 257 aa17.95■□□□□ 0.46
PVT1-220ENST00000524165 SPASTQ9UBP0 616 aa17.95■□□□□ 0.46
PVT1-220ENST00000524165 LOXL2Q9Y4K0 774 aa17.95■□□□□ 0.46
PVT1-220ENST00000524165 SPENQ96T58 3664 aaKnown RBP17.94■□□□□ 0.46
PVT1-220ENST00000524165 POM121BA6NF01 834 aa17.94■□□□□ 0.46
PVT1-220ENST00000524165 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.94■□□□□ 0.46
PVT1-220ENST00000524165 PLK1P53350 603 aa17.94■□□□□ 0.46
PVT1-220ENST00000524165 AMPD3Q01432 767 aa17.94■□□□□ 0.46
PVT1-220ENST00000524165 ESRP1Q6NXG1 681 aaKnown RBP17.94■□□□□ 0.46
PVT1-220ENST00000524165 SLC9A9Q8IVB4 645 aa17.94■□□□□ 0.46
PVT1-220ENST00000524165 SIX6OS1Q8N1H7 587 aa17.94■□□□□ 0.46
PVT1-220ENST00000524165 PDILTQ8N807 584 aa17.94■□□□□ 0.46
PVT1-220ENST00000524165 TBATAQ96M53 351 aa17.94■□□□□ 0.46
PVT1-220ENST00000524165 FOXP3Q9BZS1 431 aa17.94■□□□□ 0.46
PVT1-220ENST00000524165 B3GNT4Q9C0J1 378 aa17.94■□□□□ 0.46
PVT1-220ENST00000524165 IPO11Q9UI26 975 aaKnown RBP17.94■□□□□ 0.46
PVT1-220ENST00000524165 SDK2Q58EX2 2172 aa17.94■□□□□ 0.46
PVT1-220ENST00000524165 MED13Q9UHV7 2174 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 LMO7DNF2Z398 122 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 PRR29P0C7W0 189 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 RAD23BP54727 409 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 DAOAP59103 153 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 C1QBPQ07021 282 aaKnown RBP17.93■□□□□ 0.46
PVT1-220ENST00000524165 ACCSLQ4AC99 568 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 C1orf220Q5T0J3 134 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 SEL1L3Q68CR1 1132 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 C9orf43Q8TAL5 461 aaPredicted RBP17.93■□□□□ 0.46
PVT1-220ENST00000524165 KCTD13Q8WZ19 329 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 TATDN2Q93075 761 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 FAXDC2Q96IV6 333 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 FCRL2Q96LA5 508 aaPredicted RBP17.93■□□□□ 0.46
PVT1-220ENST00000524165 CUEDC2Q9H467 287 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 FOXJ2Q9P0K8 574 aa17.93■□□□□ 0.46
PVT1-220ENST00000524165 GCATO75600 419 aa17.92■□□□□ 0.46
PVT1-220ENST00000524165 AGFG2O95081 481 aa17.92■□□□□ 0.46
PVT1-220ENST00000524165 PCDH8O95206 1070 aa17.92■□□□□ 0.46
PVT1-220ENST00000524165 ITIH1P19827 911 aa17.92■□□□□ 0.46
PVT1-220ENST00000524165 NOS2P35228 1153 aa17.92■□□□□ 0.46
PVT1-220ENST00000524165 BST2Q10589 180 aaKnown RBP17.92■□□□□ 0.46
PVT1-220ENST00000524165 PDE1CQ14123 709 aaPredicted RBP17.92■□□□□ 0.46
PVT1-220ENST00000524165 DLG2Q15700 870 aa17.92■□□□□ 0.46
PVT1-220ENST00000524165 Q6ZVU0 165 aa17.92■□□□□ 0.46
PVT1-220ENST00000524165 PPP1R13BQ96KQ4 1090 aa17.92■□□□□ 0.46
PVT1-220ENST00000524165 CATSPER2Q96P56 530 aa17.92■□□□□ 0.46
PVT1-220ENST00000524165 SLC17A9Q9BYT1 436 aa17.92■□□□□ 0.46
PVT1-220ENST00000524165 SLC25A13Q9UJS0 675 aa17.92■□□□□ 0.46
PVT1-220ENST00000524165 POLQO75417 2590 aa17.92■□□□□ 0.46
PVT1-220ENST00000524165 ANXA6P08133 673 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 PDGFRAP16234 1089 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 POU3F2P20265 443 aaPredicted RBP17.91■□□□□ 0.46
PVT1-220ENST00000524165 ADKP55263 362 aaKnown RBP17.91■□□□□ 0.46
PVT1-220ENST00000524165 OXCT1P55809 520 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 EIF2B5Q13144 721 aaKnown RBP17.91■□□□□ 0.46
PVT1-220ENST00000524165 NNTQ13423 1086 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 GOLGA7BQ2TAP0 167 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 UNC13DQ70J99 1090 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 LGI2Q8N0V4 545 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 CCDC150Q8NCX0 1101 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 TAS1R2Q8TE23 839 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 IRGQQ8WZA9 623 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 USP7Q93009 1102 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 EPAS1Q99814 870 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 ZNF71Q9NQZ8 489 aaPredicted RBP17.91■□□□□ 0.46
PVT1-220ENST00000524165 CISHQ9NSE2 258 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 APOBEC3BQ9UH17 382 aaKnown RBP17.91■□□□□ 0.46
PVT1-220ENST00000524165 RABGEF1Q9UJ41 708 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 TSPAN16Q9UKR8 245 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 TLR6Q9Y2C9 796 aa17.91■□□□□ 0.46
PVT1-220ENST00000524165 MORC2Q9Y6X9 1032 aaPredicted RBP17.91■□□□□ 0.46
PVT1-220ENST00000524165 A0A1W2PQM1 296 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 C9orf172C9J069 976 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 KPNA3O00505 521 aaPredicted RBP17.9■□□□□ 0.46
PVT1-220ENST00000524165 SPINT1O43278 529 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 RPLP0P05388 317 aaKnown RBP17.9■□□□□ 0.46
PVT1-220ENST00000524165 CTSLP07711 333 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 RPS21P63220 83 aaKnown RBP17.9■□□□□ 0.46
PVT1-220ENST00000524165 CCL7P80098 99 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 E2F4Q16254 413 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 PRRT3Q5FWE3 981 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 KIAA1161Q6NSJ0 714 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 TICAM1Q8IUC6 712 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 RBFAQ8N0V3 343 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 ARL10Q8N8L6 244 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 TMIEQ8NEW7 156 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 SSC4DQ8WTU2 575 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 RNF34Q969K3 372 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 CCDC74AQ96AQ1 378 aa17.9■□□□□ 0.46
PVT1-220ENST00000524165 SLC39A13Q96H72 371 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms