RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 PRELID2Q8N945 189 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 CCDC89Q8N998 374 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 TMEM145Q8NBT3 493 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 ATL2Q8NHH9 583 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 EXD1Q8NHP7 514 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 CPA5Q8WXQ8 436 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 KCTD13Q8WZ19 329 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 KRT35Q92764 455 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 NINJ1Q92982 152 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 ART4Q93070 314 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 UBE2FQ969M7 185 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 ARL8AQ96BM9 186 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 C18orf8Q96DM3 657 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 ZBTB10Q96DT7 871 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 CYFIP2Q96F07 1278 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 PGM2Q96G03 612 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 SNF8Q96H20 258 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 ZBTB45Q96K62 511 aaPredicted RBP4.12□□□□□ -1.75
PVT1-211ENST00000521600 HSPA12BQ96MM6 686 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 CLUHP3Q96NS8 147 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 TRIM51Q9BSJ1 452 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 TMEM109Q9BVC6 243 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 FRMD8P1Q9BZ68 369 aaPredicted RBP4.12□□□□□ -1.75
PVT1-211ENST00000521600 TXLNGYQ9BZA5 131 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 ROPN1BQ9BZX4 212 aaPredicted RBP4.12□□□□□ -1.75
PVT1-211ENST00000521600 TRIM31Q9BZY9 425 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 CENPHQ9H3R5 247 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 FZD8Q9H461 694 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 PLEKHA4Q9H4M7 779 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 CWH43Q9H720 699 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 RPF1Q9H9Y2 349 aaKnown RBP4.12□□□□□ -1.75
PVT1-211ENST00000521600 ROPN1Q9HAT0 212 aaPredicted RBP4.12□□□□□ -1.75
PVT1-211ENST00000521600 ENTPD7Q9NQZ7 604 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 ARHGEF3Q9NR81 526 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 RXFP3Q9NSD7 469 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 SEMA4GQ9NTN9 838 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 ZDHHC18Q9NUE0 388 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 SPATA6Q9NWH7 488 aaPredicted RBP4.12□□□□□ -1.75
PVT1-211ENST00000521600 DDX56Q9NY93 547 aaKnown RBP4.12□□□□□ -1.75
PVT1-211ENST00000521600 WDR35Q9P2L0 1181 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 ASIC3Q9UHC3 531 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 CPSF3Q9UKF6 684 aaKnown RBP4.12□□□□□ -1.75
PVT1-211ENST00000521600 FBXO4Q9UKT5 387 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 ATP8A1Q9Y2Q0 1164 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 NUB1Q9Y5A7 615 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 PCDHB7Q9Y5E2 793 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 PCDHGA2Q9Y5H1 932 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 NFS1Q9Y697 457 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 ATXN2Q99700 1313 aaKnown RBP4.12□□□□□ -1.75
PVT1-211ENST00000521600 PI4KAP42356 2102 aa4.12□□□□□ -1.75
PVT1-211ENST00000521600 PTPRBP23467 1997 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 SPTA1P02549 2419 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 C2orf71A6NGG8 1288 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 TBKBP1A7MCY6 615 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 INO80B-WBP1J3KQ70 363 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 NDUFAB1O14561 156 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 AURKAO14965 403 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 RGS16O15492 202 aaPredicted RBP4.11□□□□□ -1.75
PVT1-211ENST00000521600 FAM189A1O60320 539 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 TBC1D4O60343 1298 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 KIAA0754O94854 1291 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 CPP00450 1065 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 AGTP01019 485 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 KRT7P08729 469 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 H2AFB1P0C5Y9 115 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 H2AFB2P0C5Z0 115 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 TDGF1P13385 188 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 ATF2P15336 505 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 MARK3P27448 753 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 HPDP32754 393 aaPredicted RBP4.11□□□□□ -1.75
PVT1-211ENST00000521600 CDH5P33151 784 aaPredicted RBP4.11□□□□□ -1.75
PVT1-211ENST00000521600 LSP1P33241 339 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 CA8P35219 290 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 ADCY8P40145 1251 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 SSR1P43307 286 aaKnown RBP4.11□□□□□ -1.75
PVT1-211ENST00000521600 RPL21P46778 160 aaKnown RBP4.11□□□□□ -1.75
PVT1-211ENST00000521600 MASP1P48740 699 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 MARCKSL1P49006 195 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 GSCP56915 257 aaPredicted RBP4.11□□□□□ -1.75
PVT1-211ENST00000521600 MYL6P60660 151 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 TFAMQ00059 246 aaKnown RBP4.11□□□□□ -1.75
PVT1-211ENST00000521600 KRT17Q04695 432 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 CYP4F3Q08477 520 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 MAP4K2Q12851 820 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 PCBP1Q15365 356 aaKnown RBP eCLIP4.11□□□□□ -1.751e-8■■□□□ 13.7
PVT1-211ENST00000521600 STILQ15468 1287 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 TRADDQ15628 312 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 UAP1Q16222 522 aaPredicted RBP4.11□□□□□ -1.75
PVT1-211ENST00000521600 CCNG2Q16589 344 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 HADHQ16836 314 aaKnown RBP4.11□□□□□ -1.75
PVT1-211ENST00000521600 DCAF4L1Q3SXM0 396 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 FNDC3BQ53EP0 1204 aaKnown RBP4.11□□□□□ -1.75
PVT1-211ENST00000521600 ZNF667Q5HYK9 610 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 NKAPLQ5M9Q1 402 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 ATAT1Q5SQI0 421 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 ZBTB41Q5SVQ8 909 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 ZFYVE27Q5T4F4 411 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 KCTD16Q68DU8 428 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 SPOPLQ6IQ16 392 aa4.11□□□□□ -1.75
PVT1-211ENST00000521600 EFCAB12Q6NXP0 572 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms