RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 GOT1P17174 413 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 AMPD1P23109 780 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 RPS6KA3P51812 740 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 STX3Q13277 289 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 C1orf146Q5VVC0 180 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 BHLHA9Q7RTU4 235 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 GPRIN1Q7Z2K8 1008 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 TMEM126BQ8IUX1 230 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 CCNJLQ8IV13 435 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 TFB1MQ8WVM0 346 aaKnown RBP18.68■□□□□ 0.58
SDC2-202ENST00000518385 GORASP1Q9BQQ3 440 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 XAB2Q9HCS7 855 aaKnown RBP18.68■□□□□ 0.58
SDC2-202ENST00000518385 WDR6Q9NNW5 1121 aaKnown RBP18.68■□□□□ 0.58
SDC2-202ENST00000518385 TMEM30AQ9NV96 361 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 DTLQ9NZJ0 730 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 PRKAG2Q9UGJ0 569 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 ZC3H7BQ9UGR2 993 aaKnown RBP18.68■□□□□ 0.58
SDC2-202ENST00000518385 PRG3Q9Y2Y8 225 aaPredicted RBP18.68■□□□□ 0.58
SDC2-202ENST00000518385 FAM237BA0A1B0GVD1 139 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 SDR42E2A6NKP2 422 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 FAM159BA6NKW6 160 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 AP1G1O43747 822 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 ENO1P06733 434 aaKnown RBP18.67■□□□□ 0.58
SDC2-202ENST00000518385 ACRP10323 421 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 GRK2P25098 689 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 SLC11A1P49279 550 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 CXCR3P49682 368 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 WDR5P61964 334 aaKnown RBP18.67■□□□□ 0.58
SDC2-202ENST00000518385 GBE1Q04446 702 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 NME3Q13232 169 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 BIRC2Q13490 618 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 INSCQ1MX18 579 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 HEATR6Q6AI08 1181 aaKnown RBP18.67■□□□□ 0.58
SDC2-202ENST00000518385 KCNT2Q6UVM3 1135 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 IZUMO2Q6UXV1 221 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 PRPF39Q86UA1 669 aaKnown RBP18.67■□□□□ 0.58
SDC2-202ENST00000518385 LRRTM3Q86VH5 581 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 ALDH16A1Q8IZ83 802 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 LRRC43Q8N309 656 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 GSDMBQ8TAX9 411 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 STON2Q8WXE9 905 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 ZNF689Q96CS4 500 aaPredicted RBP18.67■□□□□ 0.58
SDC2-202ENST00000518385 ZCWPW1Q9H0M4 648 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 S100A14Q9HCY8 104 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 RAB6BQ9NRW1 208 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 TMLHEQ9NVH6 421 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 DNAJC28Q9NX36 388 aa18.67■□□□□ 0.58
SDC2-202ENST00000518385 TCRBV7S3A2A0A539 114 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 EEF2KO00418 725 aaKnown RBP18.66■□□□□ 0.58
SDC2-202ENST00000518385 RFPL1O75677 317 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 GALTP07902 379 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 HTR7P34969 479 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 FDFT1P37268 417 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 GLUD2P49448 558 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 BTKQ06187 659 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 SLC10A2Q12908 348 aaPredicted RBP18.66■□□□□ 0.58
SDC2-202ENST00000518385 SEMA3BQ13214 749 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 PPIGQ13427 754 aaKnown RBP eCLIP18.66■□□□□ 0.582e-7■■■□□ 15.2
SDC2-202ENST00000518385 DPYSQ14117 519 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 CHI3L2Q15782 390 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 LIN52Q52LA3 116 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 RNF220Q5VTB9 566 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 BSPRYQ5W0U4 402 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 RFX8Q6ZV50 586 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 C16orf59Q7L2K0 433 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 ARID3BQ8IVW6 561 aaPredicted RBP18.66■□□□□ 0.58
SDC2-202ENST00000518385 ATP2A3Q93084 1043 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 PANX3Q96QZ0 392 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 HAPLN3Q96S86 360 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 KLF6Q99612 283 aaPredicted RBP18.66■□□□□ 0.58
SDC2-202ENST00000518385 OXCT2Q9BYC2 517 aaPredicted RBP18.66■□□□□ 0.58
SDC2-202ENST00000518385 ABCC13Q9NSE7 274 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 ETNK2Q9NVF9 386 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 DDIT4Q9NX09 232 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 BCAP29Q9UHQ4 241 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 ADAM28Q9UKQ2 775 aa18.66■□□□□ 0.58
SDC2-202ENST00000518385 PTPRDP23468 1912 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 ALPK3Q96L96 1907 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 GLRA3O75311 464 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 PABPC4LP0CB38 370 aaKnown RBP18.65■□□□□ 0.58
SDC2-202ENST00000518385 MAGEA3P43357 314 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 PITX1P78337 314 aaPredicted RBP18.65■□□□□ 0.58
SDC2-202ENST00000518385 DEFB103AP81534 67 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 GRM2Q14416 872 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 MARK2Q7KZI7 788 aaKnown RBP18.65■□□□□ 0.58
SDC2-202ENST00000518385 DHDDSQ86SQ9 333 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 PYROXD2Q8N2H3 581 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 CCDC33Q8N5R6 958 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 PPM1NQ8N819 430 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 DTX3LQ8TDB6 740 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 HTR3CQ8WXA8 447 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 CMTM5Q96DZ9 223 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 SPATA16Q9BXB7 569 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 OSBPL2Q9H1P3 480 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 WDCPQ9H6R7 721 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 CWH43Q9H720 699 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 MARCH5Q9NX47 278 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 HCSTQ9UBK5 93 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 SLC7A8Q9UHI5 535 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 APOBEC2Q9Y235 224 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms