RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 OAZ1P54368 228 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 ROR2Q01974 943 aaKnown RBP3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 LTBQ06643 244 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 Q0VFX4 171 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 HNF4GQ14541 408 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 FNBP1LQ5T0N5 605 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 VWA5B1Q5TIE3 1220 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 ZNF324BQ6AW86 544 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 ZNF367Q7RTV3 350 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 MYLK4Q86YV6 388 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 SPATA2LQ8IUW3 424 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 BRSK2Q8IWQ3 736 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 IQCF1Q8N6M8 205 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 PTGR2Q8N8N7 351 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 CEP76Q8TAP6 659 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 NTPCRQ9BSD7 190 aaKnown RBP3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 PCGF6Q9BYE7 350 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 SLCO5A1Q9H2Y9 848 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 KLHL31Q9H511 634 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 PLK2Q9NYY3 685 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 BAG5Q9UL15 447 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 TARSL2A2RTX5 802 aaKnown RBP3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 DDTLA6NHG4 134 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 OR6C75A6NL08 312 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 HNRNPRO43390 633 aaKnown RBP3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 LDB2O43679 373 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 LIASO43766 372 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 CLDN7O95471 211 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 CYP4B1P13584 511 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 CHKAP35790 457 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 AVPR1AP37288 418 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 PDLIM4P50479 330 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 CUL4BQ13620 913 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 ZNF284Q2VY69 593 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 ZNF484Q5JVG2 852 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 GALNT7Q86SF2 657 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 CAMK1DQ8IU85 385 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 FAM185AQ8N0U4 392 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 SCAIQ8N9R8 606 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 LINS1Q8NG48 757 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 NUDCD2Q8WVJ2 157 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 FAR1Q8WVX9 515 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 GOLGA1Q92805 767 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 RILPL2Q969X0 211 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 MED30Q96HR3 178 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 CATSPERBQ9H7T0 1116 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 G6PC2Q9NQR9 355 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 THAP1Q9NVV9 213 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 WWOXQ9NZC7 414 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 FZD10Q9ULW2 581 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 ICKQ9UPZ9 632 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 SLC4A4Q9Y6R1 1079 aa3.68□□□□□ -1.82
HMGB1P29-201ENST00000505659 TRIP12Q14669 1992 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 PRR23D1E9PI22 279 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 PAPSS2O95340 614 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 PRR23D2P0DMB1 279 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 CD72P21854 359 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 PRKCHP24723 683 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 ITGB8P26012 769 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 CST5P28325 142 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 PTPN9P43378 593 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 RBM5P52756 815 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 ZP1P60852 638 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 CRYZQ08257 329 aaKnown RBP3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 FOXO1Q12778 655 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 SMAD1Q15797 465 aaKnown RBP3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 AP5B1Q2VPB7 878 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 DNTTIP2Q5QJE6 756 aaKnown RBP3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 TBC1D9BQ66K14 1250 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 ADHFE1Q8IWW8 467 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 NEXN-AS1Q8NBZ9 246 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 ELP5Q8TE02 316 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 KTI12Q96EK9 354 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 FRG2BQ96QU4 278 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 IFT27Q9BW83 186 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 CADM1Q9BY67 442 aaKnown RBP3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 LHPPQ9H008 270 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 CXorf56Q9H5V9 222 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 HIF1ANQ9NWT6 349 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 HDAC6Q9UBN7 1215 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 OSGIN2Q9Y236 505 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 RAI2Q9Y5P3 530 aa3.67□□□□□ -1.82
HMGB1P29-201ENST00000505659 MS4A18H0YCH9 400 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 HSPB6O14558 160 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 HLA-DQA2P01906 255 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 CLCNKBP51801 687 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 RHBDL3P58872 404 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 EGR4Q05215 589 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 POSTNQ15063 836 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 ASIC2Q16515 512 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 RUNDC3AQ59EK9 446 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 PRAMEF19Q5SWL8 479 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 OTUD1Q5VV17 481 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 HEPHL1Q6MZM0 1159 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 RBM23Q86U06 439 aaKnown RBP3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 WDR5BQ86VZ2 330 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 SUGP1Q8IWZ8 645 aaKnown RBP3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 MYCT1Q8N699 235 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms