RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 RETSATQ6NUM9 610 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 H2AFVQ71UI9 128 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 PSTKQ8IV42 348 aaKnown RBP13.19□□□□□ -0.3
COL5A1-206ENST00000465877 DEFB119Q8N690 84 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 OR8D1Q8WZ84 308 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 ARHGEF2Q92974 986 aaKnown RBP13.19□□□□□ -0.3
COL5A1-206ENST00000465877 TCEAL3Q969E4 200 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 CCDC114Q96M63 670 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 CCDC42Q96M95 316 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 SPON2Q9BUD6 331 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 GPR174Q9BXC1 333 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 ACE2Q9BYF1 805 aaPredicted RBP13.19□□□□□ -0.3
COL5A1-206ENST00000465877 MAGEH1Q9H213 219 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 VPS45Q9NRW7 570 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 CTTNBP2NLQ9P2B4 639 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 UVRAGQ9P2Y5 699 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 SERGEFQ9UGK8 458 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 A0A1W2PP55 124 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 MEI4A8MW99 385 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 WASH4PA8MWX3 477 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 ALOX15BO15296 676 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 SMAD6O43541 496 aaKnown RBP13.18□□□□□ -0.3
COL5A1-206ENST00000465877 BNIP3LO60238 219 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 FOXD2O60548 495 aaPredicted RBP13.18□□□□□ -0.3
COL5A1-206ENST00000465877 IL1BP01584 269 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 TMEM253P0C7T8 217 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 ZNF806P0C7X5 589 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 GOT1P17174 413 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 ITPKAP23677 461 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 DPP6P42658 865 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 POLD3Q15054 466 aaPredicted RBP13.18□□□□□ -0.3
COL5A1-206ENST00000465877 DPYSL2Q16555 572 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 KCNT1Q5JUK3 1230 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 USP30Q70CQ3 517 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 DSG4Q86SJ6 1040 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 SYT12Q8IV01 421 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 AADATQ8N5Z0 425 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 C12orf50Q8NA57 414 aaPredicted RBP13.18□□□□□ -0.3
COL5A1-206ENST00000465877 PIGKQ92643 395 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 FAM129BQ96TA1 746 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 BTBD1Q9H0C5 482 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 NOL6Q9H6R4 1146 aaKnown RBP13.18□□□□□ -0.3
COL5A1-206ENST00000465877 ZWILCHQ9H900 591 aa13.18□□□□□ -0.3
COL5A1-206ENST00000465877 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.18□□□□□ -0.3
COL5A1-206ENST00000465877 CXorf51AA0A1B0GTR3 108 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 LNP1A1A4G5 178 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 PATE3B3GLJ2 98 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 C1QTNF3-AMACRE9PGA6 284 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 MYO1FO00160 1098 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 SEMA4FO95754 770 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 C5AR1P21730 350 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 SLC8A1P32418 973 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 ACSL1P33121 698 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 HOXD12P35452 270 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 ZNF135P52742 658 aaPredicted RBP13.17□□□□□ -0.3
COL5A1-206ENST00000465877 GEMIN4P57678 1058 aaKnown RBP13.17□□□□□ -0.3
COL5A1-206ENST00000465877 PARP15Q460N3 678 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 AASDHQ4L235 1098 aaPredicted RBP13.17□□□□□ -0.3
COL5A1-206ENST00000465877 RFX8Q6ZV50 586 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 ZNF354CQ86Y25 554 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 UMODL1-AS1Q8N2C9 162 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 CADM4Q8NFZ8 388 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 OR2A12Q8NGT7 310 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 TEKT4Q8WW24 435 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 HSPH1Q92598 858 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 FOXJ1Q92949 421 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 HMCESQ96FZ2 354 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 ZNF419Q96HQ0 510 aaPredicted RBP13.17□□□□□ -0.3
COL5A1-206ENST00000465877 CEP44Q9C0F1 390 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 TNKS2Q9H2K2 1166 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 SGK2Q9HBY8 427 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 OSGEPQ9NPF4 335 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 TMEM74BQ9NUR3 256 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 FBXL12Q9NXK8 326 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 PILRBQ9UKJ0 227 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 SARDHQ9UL12 918 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 FZD4Q9ULV1 537 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 HPCAL4Q9UM19 191 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 NCKAP1Q9Y2A7 1128 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 FCF1Q9Y324 198 aaKnown RBP13.17□□□□□ -0.3
COL5A1-206ENST00000465877 ACTL7AQ9Y615 435 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 GON4LQ3T8J9 2241 aa13.17□□□□□ -0.3
COL5A1-206ENST00000465877 DOCK9Q9BZ29 2069 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 ZSCAN5CA6NGD5 496 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-206ENST00000465877 RASA4BC9J798 803 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 H3BRJ5 948 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 MCF2LO15068 1137 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 RASA4O43374 803 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 ZNF821O75541 412 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-206ENST00000465877 RNASEH2AO75792 299 aaKnown RBP13.16□□□□□ -0.3
COL5A1-206ENST00000465877 PROSCO94903 275 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 CD160O95971 181 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 CTSLP07711 333 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 DRD3P35462 400 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 METAP1P53582 386 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 ADPRHP54922 357 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 YBEYP58557 167 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-206ENST00000465877 SFSWAPQ12872 951 aaKnown RBP13.16□□□□□ -0.3
COL5A1-206ENST00000465877 DPYSQ14117 519 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 SYCP2LQ5T4T6 812 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms