RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 GNA12Q03113 381 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 FOXC1Q12948 553 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 KLHL40Q2TBA0 621 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 POM121L1PQ3SYA9 428 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 FAM72AQ5TYM5 149 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 FAM72DQ6L9T8 149 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 C22orf39Q6P5X5 142 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.36■□□□□ 0.69
COL5A1-203ENST00000460264 FAM72BQ86X60 149 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 OR2A12Q8NGT7 310 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 NTAN1Q96AB6 310 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 SLC6A18Q96N87 628 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 CAMK1GQ96NX5 476 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 MCEEQ96PE7 176 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 SPON2Q9BUD6 331 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 EBF2Q9HAK2 575 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 ANKRD6Q9Y2G4 727 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 SNX11Q9Y5W9 270 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 A0A1W2PQC6 194 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 SYCE3A1L190 88 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 CCP110O43303 1012 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 PLRG1O43660 514 aaKnown RBP19.35■□□□□ 0.69
COL5A1-203ENST00000460264 RTN2O75298 545 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 ZMPSTE24O75844 475 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 LRIG2O94898 1065 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 CTSLP07711 333 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 PLEKP08567 350 aaPredicted RBP19.35■□□□□ 0.69
COL5A1-203ENST00000460264 RHOQP17081 205 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 ZNF143P52747 638 aaPredicted RBP19.35■□□□□ 0.69
COL5A1-203ENST00000460264 PPP2CBP62714 309 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 PPP2CAP67775 309 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 FAM193AP78312 1265 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 SCAPQ12770 1279 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 CNTN1Q12860 1018 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 KCNT1Q5JUK3 1230 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 PPP1R15BQ5SWA1 713 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 AGBL4Q5VU57 503 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 ACAD10Q6JQN1 1059 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 RWDD4Q6NW29 188 aaKnown RBP19.35■□□□□ 0.69
COL5A1-203ENST00000460264 NLRP14Q86W24 1093 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 MCOLN2Q8IZK6 566 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 CCDC114Q96M63 670 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 NAP1L5Q96NT1 182 aaPredicted RBP19.35■□□□□ 0.69
COL5A1-203ENST00000460264 MAGEB5Q9BZ81 275 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 ATP13A1Q9HD20 1204 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 TM7SF3Q9NS93 570 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 TAS2R14Q9NYV8 317 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 TPX2Q9ULW0 747 aaKnown RBP19.35■□□□□ 0.69
COL5A1-203ENST00000460264 FRYQ5TBA9 3013 aa19.35■□□□□ 0.69
COL5A1-203ENST00000460264 TBC1D3DA0A087WVF3 549 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 TBC1D3IA0A087WXS9 549 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 TBC1D3EA0A087X179 549 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 TBC1D3KA0A087X1G2 549 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 ANKRD62A6NC57 917 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 TBC1D3FA6NER0 549 aaPredicted RBP19.34■□□□□ 0.69
COL5A1-203ENST00000460264 TBC1D3LB9A6J9 549 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 LATO43561 262 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 TBC1D3HP0C7X1 549 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 MAPKAPK2P49137 400 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 SERPINH1P50454 418 aaKnown RBP19.34■□□□□ 0.69
COL5A1-203ENST00000460264 RPL7AP62424 266 aaKnown RBP19.34■□□□□ 0.69
COL5A1-203ENST00000460264 ARF5P84085 180 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 HNRNPDQ14103 355 aaKnown RBP19.34■□□□□ 0.69
COL5A1-203ENST00000460264 E4F1Q66K89 784 aaPredicted RBP19.34■□□□□ 0.69
COL5A1-203ENST00000460264 TBC1D3GQ6DHY5 549 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 TBC1D3CQ6IPX1 549 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 RETSATQ6NUM9 610 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 ADAT2Q7Z6V5 191 aaKnown RBP19.34■□□□□ 0.69
COL5A1-203ENST00000460264 TBC1D3Q8IZP1 549 aaPredicted RBP19.34■□□□□ 0.69
COL5A1-203ENST00000460264 TBC1D31Q96DN5 1066 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 CNPY3Q9BT09 278 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 ACE2Q9BYF1 805 aaPredicted RBP19.34■□□□□ 0.69
COL5A1-203ENST00000460264 TNKS2Q9H2K2 1166 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 KDM4CQ9H3R0 1056 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 RETREG1Q9H6L5 497 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 NDFIP2Q9NV92 336 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 TMEM248Q9NWD8 314 aa19.34■□□□□ 0.69
COL5A1-203ENST00000460264 FARP1Q9Y4F1 1045 aaPredicted RBP19.34■□□□□ 0.69
COL5A1-203ENST00000460264 KMT2BQ9UMN6 2715 aaPredicted RBP19.34■□□□□ 0.69
COL5A1-203ENST00000460264 USP24Q9UPU5 2620 aa19.33■□□□□ 0.69
COL5A1-203ENST00000460264 AKAP13Q12802 2813 aa19.33■□□□□ 0.69
COL5A1-203ENST00000460264 VILLO15195 856 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 TOP3BO95985 862 aaKnown RBP19.33■□□□□ 0.68
COL5A1-203ENST00000460264 TNFAIP3P21580 790 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 CHRNA3P32297 505 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 ACVRL1P37023 503 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 ETFBP38117 255 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 CTSKP43235 329 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 ASIC2Q16515 512 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 SLFN11Q7Z7L1 901 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 CHST14Q8NCH0 376 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 CEP44Q9C0F1 390 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 TTYH3Q9C0H2 523 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 AIPL1Q9NZN9 384 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 PCDHGB2Q9Y5G2 931 aa19.33■□□□□ 0.68
COL5A1-203ENST00000460264 KPNA3O00505 521 aaPredicted RBP19.32■□□□□ 0.68
COL5A1-203ENST00000460264 WNT9AO14904 365 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 CBFA2T3O75081 653 aa19.32■□□□□ 0.68
COL5A1-203ENST00000460264 ZNF821O75541 412 aaPredicted RBP19.32■□□□□ 0.68
COL5A1-203ENST00000460264 SERPINC1P01008 464 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms