RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 ATP11CQ8NB49 1132 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 OR7D4Q8NG98 312 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 OR14C36Q8NHC7 312 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 PIP4K2CQ8TBX8 421 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 FAM172AQ8WUF8 416 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 SELENOOQ9BVL4 669 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 TM7SF3Q9NS93 570 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 SNX11Q9Y5W9 270 aa19.85■□□□□ 0.77
USP40-207ENST00000450940 A0A1B0GTH6 734 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 A0A1W2PQC6 194 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 C1QTNF3-AMACRE9PGA6 284 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 PLRG1O43660 514 aaKnown RBP19.84■□□□□ 0.77
USP40-207ENST00000450940 ZNF821O75541 412 aaPredicted RBP19.84■□□□□ 0.77
USP40-207ENST00000450940 RHOQP17081 205 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 GPD1P21695 349 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 ZNF143P52747 638 aaPredicted RBP19.84■□□□□ 0.77
USP40-207ENST00000450940 GNA12Q03113 381 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 SCAPQ12770 1279 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 ZNF423Q2M1K9 1284 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 KCNT1Q5JUK3 1230 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 AGBL4Q5VU57 503 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 RETSATQ6NUM9 610 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 GLRX5Q86SX6 157 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 NLRP14Q86W24 1093 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 MCOLN2Q8IZK6 566 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 TMIEQ8NEW7 156 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 VCPIP1Q96JH7 1222 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 CAMK1GQ96NX5 476 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 ACE2Q9BYF1 805 aaPredicted RBP19.84■□□□□ 0.77
USP40-207ENST00000450940 NEU3Q9UQ49 428 aa19.84■□□□□ 0.77
USP40-207ENST00000450940 FAM72CH0Y354 149 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 RTN2O75298 545 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 CTSLP07711 333 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 PLEKP08567 350 aaPredicted RBP19.83■□□□□ 0.77
USP40-207ENST00000450940 GLDCP23378 1020 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 RRM1P23921 792 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 CHRNA3P32297 505 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 MAPKAPK2P49137 400 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 CNTN1Q12860 1018 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 FOXC1Q12948 553 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 TRIP6Q15654 476 aaKnown RBP19.83■□□□□ 0.77
USP40-207ENST00000450940 FILIP1LQ4L180 1135 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 FAM72AQ5TYM5 149 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 FAM72DQ6L9T8 149 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 PPP1R2P3Q6NXS1 205 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 LINGO4Q6UY18 593 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 FAM72BQ86X60 149 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 CCDC185Q8N715 623 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 CCDC114Q96M63 670 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 NAP1L5Q96NT1 182 aaPredicted RBP19.83■□□□□ 0.77
USP40-207ENST00000450940 MAGEB5Q9BZ81 275 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 CEP44Q9C0F1 390 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 SEPT11Q9NVA2 429 aaKnown RBP19.83■□□□□ 0.77
USP40-207ENST00000450940 TMEM248Q9NWD8 314 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 ARHGAP20Q9P2F6 1191 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 PCOLCE2Q9UKZ9 415 aa19.83■□□□□ 0.77
USP40-207ENST00000450940 FARP1Q9Y4F1 1045 aaPredicted RBP19.83■□□□□ 0.77
USP40-207ENST00000450940 TBC1D3DA0A087WVF3 549 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 TBC1D3IA0A087WXS9 549 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 TBC1D3EA0A087X179 549 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 TBC1D3KA0A087X1G2 549 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 A0A1W2PR77 199 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 TBC1D3FA6NER0 549 aaPredicted RBP19.82■□□□□ 0.76
USP40-207ENST00000450940 TBC1D3LB9A6J9 549 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 PLK4O00444 970 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 DFNA5O60443 496 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 LRIG2O94898 1065 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 TRIM16O95361 564 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 CD160O95971 181 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 TBC1D3HP0C7X1 549 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 NUDT1P36639 197 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 ETFBP38117 255 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 SERPINH1P50454 418 aaKnown RBP19.82■□□□□ 0.76
USP40-207ENST00000450940 ARF5P84085 180 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 TBC1D3GQ6DHY5 549 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 TBC1D3CQ6IPX1 549 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 DNAJC24Q6P3W2 148 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 C22orf39Q6P5X5 142 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 TRIM69Q86WT6 500 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 DRC7Q8IY82 874 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 TBC1D3Q8IZP1 549 aaPredicted RBP19.82■□□□□ 0.76
USP40-207ENST00000450940 BAHD1Q8TBE0 780 aaPredicted RBP19.82■□□□□ 0.76
USP40-207ENST00000450940 SLC6A18Q96N87 628 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 SPON2Q9BUD6 331 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 ATP13A1Q9HD20 1204 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 NDFIP2Q9NV92 336 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 AIPL1Q9NZN9 384 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 FRYQ5TBA9 3013 aa19.82■□□□□ 0.76
USP40-207ENST00000450940 CBX4O00257 560 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 WNT9AO14904 365 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 FLRT2O43155 660 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 CCP110O43303 1012 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 PCDHGA12O60330 932 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 TOP3BO95985 862 aaKnown RBP19.81■□□□□ 0.76
USP40-207ENST00000450940 WNT1P04628 370 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 TNFAIP3P21580 790 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 CD38P28907 300 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 L1CAMP32004 1257 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 PRKCIP41743 596 aa19.81■□□□□ 0.76
USP40-207ENST00000450940 TAS2R38P59533 333 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms