RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 FAM178BQ8IXR5 827 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 C10orf53Q8N6V4 93 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CEP112Q8N8E3 955 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZNF321PQ8N8H1 164 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 TRPV1Q8NER1 839 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ATP8B4Q8TF62 1192 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 KRT35Q92764 455 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 SYN2Q92777 582 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 INPP5DQ92835 1189 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 GFM2Q969S9 779 aaKnown RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 RAB7BQ96AH8 199 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CIDECQ96AQ7 238 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 LRRC39Q96DD0 335 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CHMP6Q96FZ7 201 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 SHDQ96IW2 340 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ANKRD36BP1Q96IX9 119 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 VCPIP1Q96JH7 1222 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CEP170P1Q96L14 293 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ADAD1Q96M93 576 aaKnown RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 NSMCE3Q96MG7 304 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 OPALINQ96PE5 141 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 TRAPPC9Q96Q05 1148 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 LMF1Q96S06 567 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 TBCBQ99426 244 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 PKP4Q99569 1192 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 MRPL1Q9BYD6 325 aaKnown RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 YIPF3Q9GZM5 350 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 MEGF9Q9H1U4 602 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 KCNH6Q9H252 994 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CARD9Q9H257 536 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 SLC12A5Q9H2X9 1139 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 NKX2-4Q9H2Z4 354 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 TASP1Q9H6P5 420 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 ATP13A3Q9H7F0 1226 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 L2HGDHQ9H9P8 463 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 VCX3AQ9NNX9 186 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CNGB3Q9NQW8 809 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 DTLQ9NZJ0 730 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 SAMD15Q9P1V8 674 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 DBF4Q9UBU7 674 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 AASSQ9UDR5 926 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 SEC63Q9UGP8 760 aaKnown RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 DNM3Q9UQ16 869 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 RUVBL1Q9Y265 456 aaKnown RBP4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 LRCH1Q9Y2L9 728 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 NOX1Q9Y5S8 564 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 NUMBLQ9Y6R0 609 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 A2ML1A8K2U0 1454 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 CCDC141Q6ZP82 1450 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 MLH3Q9UHC1 1453 aa4.87□□□□□ -1.63
HMGB3P9-201ENST00000441799 EIF2AK4Q9P2K8 1649 aaKnown RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 EP400Q96L91 3159 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 A0A1B0GVG6 124 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 TCRBV5S2A0A599 114 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SRRM3A6NNA2 597 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 TISP43B9A030 160 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 B9A039 149 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 GOLGA8KD6RF30 607 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 F8W8V4 182 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 H0YCG3 227 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 PCDH17O14917 1159 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 XPO1O14980 1071 aaKnown RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZSCAN12O43309 604 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 TRAPPC3O43617 180 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 KRT86O43790 486 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ADCY3O60266 1144 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 CACNG3O60359 315 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 TLR2O60603 784 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 IDH1O75874 414 aaKnown RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SNAPINO95295 136 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 KRT6AP02538 564 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 KRT6BP04259 564 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ANXA6P08133 673 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SERPINF2P08697 491 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 RPS17P08708 135 aaKnown RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 HMOX1P09601 288 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 TXNP10599 105 aaKnown RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 PRPS2P11908 318 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 CHN1P15882 459 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 RHCEP18577 417 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 PSMA2P25787 234 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 PTBP1P26599 531 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 EEF1DP29692 281 aaKnown RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ME1P48163 572 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 DHPSP49366 369 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SELENOPP49908 381 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 CPT1AP50416 773 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ATP12AP54707 1039 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 GPX6P59796 221 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 PSMC5P62195 406 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 YWHAZP63104 245 aaKnown RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ST5P78524 1137 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ARHGAP8P85298 464 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 RHDQ02161 417 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 GCNT1Q02742 428 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 TNFAIP2Q03169 654 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 KRT17Q04695 432 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 BTKQ06187 659 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 IFFO1Q0D2I5 559 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 RAPSNQ13702 412 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 384.6 ms