RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 CYP7A1P22680 504 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 SHMT1P34896 483 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 MAGEA4P43358 317 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 RANBP1P43487 201 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 TUFMP49411 452 aaKnown RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 SMCPP49901 116 aaPredicted RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 ZNF81P51508 661 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 ELP6Q0PNE2 266 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 KCNC3Q14003 757 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 COL9A3Q14050 684 aaPredicted RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 UBAP2LQ14157 1087 aaKnown RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 GRM2Q14416 872 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 POLD3Q15054 466 aaPredicted RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 SEC23BQ15437 767 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 FAM47AQ5JRC9 791 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 KIAA1755Q5JYT7 1200 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 GTF2IRD2BQ6EKJ0 949 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 BORAQ6PGQ7 559 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 TRAT1Q6PIZ9 186 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 SLC22A25Q6T423 547 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 NPNTQ6UXI9 565 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 FKBP9P1Q75LS8 142 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 GTF2IRD2Q86UP8 949 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 GATAD2AQ86YP4 633 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 BBS5Q8N3I7 341 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 RTL3Q8N8U3 475 aaKnown RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 CLRN3Q8NCR9 226 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 CLHC1Q8NHS4 586 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 ZNF461Q8TAF7 563 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 STT3BQ8TCJ2 826 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 LZICQ8WZA0 190 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 SLC9A6Q92581 669 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 ACSF2Q96CM8 615 aaPredicted RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 TMA16Q96EY4 203 aaKnown RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 ZNF274Q96GC6 653 aaPredicted RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 ZNF560Q96MR9 790 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 CAMK1GQ96NX5 476 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 USP28Q96RU2 1077 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 RAD9AQ99638 391 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 AIFM2Q9BRQ8 373 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 THUMPD3Q9BV44 507 aaKnown RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 COLEC11Q9BWP8 271 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 ZNF518BQ9C0D4 1074 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 SPATC1LQ9H0A9 340 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 NDST4Q9H3R1 872 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 SUV39H2Q9H5I1 410 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 C12orf10Q9HB07 376 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 MRM3Q9HC36 420 aaKnown RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 EMC7Q9NPA0 242 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 DCP1AQ9NPI6 582 aaPredicted RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 LATS2Q9NRM7 1088 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 FARSBQ9NSD9 589 aaKnown RBP5.68□□□□□ -1.5
RFC3-202ENST00000434425 LRFN1Q9P244 771 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 MAD2L2Q9UI95 211 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 SERPINB13Q9UIV8 391 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 SLC8A2Q9UPR5 921 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 CORO2BQ9UQ03 480 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 DYRK1BQ9Y463 629 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 SNX9Q9Y5X1 595 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 TRIOO75962 3097 aa5.68□□□□□ -1.5
RFC3-202ENST00000434425 MYH15Q9Y2K3 1946 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.67□□□□□ -1.5
RFC3-202ENST00000434425 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.67□□□□□ -1.5
RFC3-202ENST00000434425 TTC26A0AVF1 554 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 CCDC162PA2VCL2 907 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 LGALS16A8MUM7 142 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 GRXCR1A8MXD5 290 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 KPNA7A9QM74 516 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 PRODHO43272 600 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 ADAM20O43506 726 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 IDH3BO43837 385 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 TSPAN9O75954 239 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 SASH3O75995 380 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 ERLIN2O94905 339 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 GNA14O95837 355 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 CLPTM1O96005 669 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 OTCP00480 354 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 PGK1P00558 417 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 OPN1LWP04000 364 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 RARBP10826 455 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 HOXD8P13378 290 aaPredicted RBP5.67□□□□□ -1.5
RFC3-202ENST00000434425 POU2F1P14859 743 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 TAL1P17542 331 aaPredicted RBP5.67□□□□□ -1.5
RFC3-202ENST00000434425 CPN2P22792 545 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 CFL1P23528 166 aaKnown RBP5.67□□□□□ -1.5
RFC3-202ENST00000434425 IL32P24001 234 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 TNFRSF8P28908 595 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 CDC25CP30307 473 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 CCT6AP40227 531 aaKnown RBP5.67□□□□□ -1.5
RFC3-202ENST00000434425 ME1P48163 572 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 LSSP48449 732 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 PCP4P48539 62 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 HSPA13P48723 471 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 STARP49675 285 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 CCR3P51677 355 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 CCR9P51686 369 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 MRPL12P52815 198 aaKnown RBP5.67□□□□□ -1.5
RFC3-202ENST00000434425 ATXN3P54252 364 aaPredicted RBP5.67□□□□□ -1.5
RFC3-202ENST00000434425 PRRX1P54821 245 aa5.67□□□□□ -1.5
RFC3-202ENST00000434425 MFAP3P55082 362 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms