RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PJA1Q8NG27 643 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 ZFPM2Q8WW38 1151 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 HTATIP2Q9BUP3 242 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 TAOK3Q9H2K8 898 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 AAMDCQ9H7C9 122 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 ERVK-5Q9HDB9 667 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 FSCN3Q9NQT6 498 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 SRP68Q9UHB9 627 aaKnown RBP5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 UTS2RQ9UKP6 389 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 AFDNP55196 1824 aaKnown RBP5.46□□□□□ -1.53
HMGB3P5-201ENST00000428894 FER1L6Q2WGJ9 1857 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 A0A0G2JK05 382 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 DPPA5A6NC42 116 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 PODXLO00592 558 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 SMAD6O43541 496 aaKnown RBP5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 TAF5LO75529 589 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 RFPL3SP0C7P2 107 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 EEF1GP26641 437 aaKnown RBP5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 MAP2K2P36507 400 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 PTGR1Q14914 329 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 CNTROBQ8N137 903 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 FAM47BQ8NA70 645 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 SRFBP1Q8NEF9 429 aaKnown RBP5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 SLC22A17Q8WUG5 538 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 NPIPB3Q92617 1050 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 ZNF622Q969S3 477 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 RIPOR3Q96MK2 946 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 HIPK2Q9H2X6 1198 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 TAF1DQ9H5J8 278 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 NARFQ9UHQ1 456 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 ABT1Q9ULW3 272 aaKnown RBP5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 CA14Q9ULX7 337 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 UBE2J1Q9Y385 318 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 DTNAQ9Y4J8 743 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 CEP83Q9Y592 693 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 PCDHB7Q9Y5E2 793 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 DLEC1Q9Y238 1755 aa5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 TNRC18O15417 2968 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P5-201ENST00000428894 ATG13O75143 517 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 KAT7O95251 611 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 ITGA5P08648 1049 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 CIITAP33076 1130 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 PPATQ06203 517 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 C1orf141Q5JVX7 400 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 NUGGCQ68CJ6 796 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 KSR2Q6VAB6 950 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 C11orf96Q7Z7L8 435 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 ASB5Q8WWX0 329 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 EME1Q96AY2 570 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 THOC3Q96J01 351 aaKnown RBP5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 PAAF1Q9BRP4 392 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 EPS8L2Q9H6S3 715 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 HELLSQ9NRZ9 838 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 HACL1Q9UJ83 578 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 LRP12Q9Y561 859 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 NCAPD2Q15021 1401 aa5.45□□□□□ -1.54
HMGB3P5-201ENST00000428894 GXYLT2A0PJZ3 443 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 RASA4BC9J798 803 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 HNRNPDLO14979 420 aaKnown RBP5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 RASA4O43374 803 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 PPP6R2O75170 966 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 TBXAS1P24557 533 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 EPHX2P34913 555 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 SLC37A1P57057 533 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 ERV3-1Q14264 604 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 LONRF1Q17RB8 773 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 PIK3CD-AS1Q5SR53 167 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 C6orf10Q5SRN2 563 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 TTLL5Q6EMB2 1281 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 ISM2Q6H9L7 571 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 WDR93Q6P2C0 686 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 TRAPPC11Q7Z392 1133 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 FAR2Q96K12 515 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 ZNF347Q96SE7 839 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 SIN3AQ96ST3 1273 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 FZD3Q9NPG1 666 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 SLC8A2Q9UPR5 921 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 LAMP3Q9UQV4 416 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 CASP8AP2Q9UKL3 1982 aa5.44□□□□□ -1.54
HMGB3P5-201ENST00000428894 NRXN2Q9P2S2 1712 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 NPHP1O15259 732 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 CNTN5O94779 1100 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 NTSR2O95665 410 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 WNT1P04628 370 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 CHRNB1P11230 501 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 CDC25AP30304 524 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 POLD2P49005 469 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 P2RX3P56373 397 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 GAD2Q05329 585 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 HLTFQ14527 1009 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 RAB30Q15771 203 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 IZUMO3Q5VZ72 239 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 ARL6IP4Q66PJ3 421 aaKnown RBP5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 SLC39A5Q6ZMH5 540 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 DDIASQ8IXT1 998 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 PARD3BQ8TEW8 1205 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 CENPIQ92674 756 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 GCC1Q96CN9 775 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 MCRS1Q96EZ8 462 aa5.43□□□□□ -1.54
HMGB3P5-201ENST00000428894 CAPNS2Q96L46 248 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms