RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TMEM92Q6UXU6 159 aa31.23■■■□□ 2.59
CSNK1E-206ENST00000413574 TRMT11Q7Z4G4 463 aaKnown RBP31.23■■■□□ 2.59
CSNK1E-206ENST00000413574 SPEM1Q8N4L4 309 aa31.23■■■□□ 2.59
CSNK1E-206ENST00000413574 SH2D3CQ8N5H7 860 aa31.23■■■□□ 2.59
CSNK1E-206ENST00000413574 ATP11CQ8NB49 1132 aa31.23■■■□□ 2.59
CSNK1E-206ENST00000413574 HAUS1Q96CS2 278 aa31.23■■■□□ 2.59
CSNK1E-206ENST00000413574 SPATA6Q9NWH7 488 aaPredicted RBP31.23■■■□□ 2.59
CSNK1E-206ENST00000413574 HS3ST2Q9Y278 367 aa31.23■■■□□ 2.59
CSNK1E-206ENST00000413574 CACNA1IQ9P0X4 2223 aa31.22■■■□□ 2.59
CSNK1E-206ENST00000413574 SRCP12931 536 aa31.22■■■□□ 2.59
CSNK1E-206ENST00000413574 MAGEA9P43362 315 aa31.22■■■□□ 2.59
CSNK1E-206ENST00000413574 SDE2Q6IQ49 451 aa31.22■■■□□ 2.59
CSNK1E-206ENST00000413574 RETSATQ6NUM9 610 aa31.22■■■□□ 2.59
CSNK1E-206ENST00000413574 GABRG3Q99928 467 aa31.22■■■□□ 2.59
CSNK1E-206ENST00000413574 IPO11Q9UI26 975 aaKnown RBP31.22■■■□□ 2.59
CSNK1E-206ENST00000413574 CKAP5Q14008 2032 aa31.22■■■□□ 2.59
CSNK1E-206ENST00000413574 ATG13O75143 517 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 ATP1A1P05023 1023 aaKnown RBP31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 HOXB2P14652 356 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 VAV1P15498 845 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 PECAM1P16284 738 aaPredicted RBP31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 ZFXP17010 805 aaPredicted RBP31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 COL9A1P20849 921 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 CXCR5P32302 372 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 PTPN7P35236 360 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 SATB1Q01826 763 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 GALNT2Q10471 571 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 ACCSLQ4AC99 568 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 KIAA1211LQ6NV74 962 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 UBE2Q2Q8WVN8 375 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 WDR24Q96S15 920 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 PDFQ9HBH1 243 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 ZKSCAN5Q9Y2L8 839 aa31.21■■■□□ 2.59
CSNK1E-206ENST00000413574 NPC1O15118 1278 aa31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 PRAMEF11O60813 436 aa31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 EPHX1P07099 455 aa31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 CETN2P41208 172 aa31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 SERPINH1P50454 418 aaKnown RBP31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 HSF5Q4G112 596 aaPredicted RBP31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 EOGTQ5NDL2 527 aa31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 BBS12Q6ZW61 710 aa31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 SYT13Q7L8C5 426 aa31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 LRFN3Q9BTN0 628 aa31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 PRDM16Q9HAZ2 1276 aa31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 SP110Q9HB58 689 aa31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 FCF1Q9Y324 198 aaKnown RBP31.2■■■□□ 2.59
CSNK1E-206ENST00000413574 A0A1W2PQF6 199 aa31.2■■■□□ 2.58
CSNK1E-206ENST00000413574 MAFKO60675 156 aa31.2■■■□□ 2.58
CSNK1E-206ENST00000413574 NNMTP40261 264 aa31.2■■■□□ 2.58
CSNK1E-206ENST00000413574 DLG2Q15700 870 aa31.2■■■□□ 2.58
CSNK1E-206ENST00000413574 B4GALNT4Q76KP1 1039 aa31.2■■■□□ 2.58
CSNK1E-206ENST00000413574 ATPAF2Q8N5M1 289 aa31.2■■■□□ 2.58
CSNK1E-206ENST00000413574 DTWD2Q8NBA8 298 aa31.2■■■□□ 2.58
CSNK1E-206ENST00000413574 ATP9BO43861 1147 aa31.19■■■□□ 2.58
CSNK1E-206ENST00000413574 GARSP41250 739 aaKnown RBP31.19■■■□□ 2.58
CSNK1E-206ENST00000413574 CRY1Q16526 586 aa31.19■■■□□ 2.58
CSNK1E-206ENST00000413574 KDM1BQ8NB78 822 aa31.19■■■□□ 2.58
CSNK1E-206ENST00000413574 FRS2Q8WU20 508 aa31.19■■■□□ 2.58
CSNK1E-206ENST00000413574 EFR3BQ9Y2G0 817 aa31.19■■■□□ 2.58
CSNK1E-206ENST00000413574 TCRBV7S2A1N4TA0A589 114 aa31.18■■■□□ 2.58
CSNK1E-206ENST00000413574 TGM2P21980 687 aa31.18■■■□□ 2.58
CSNK1E-206ENST00000413574 SLC20A2Q08357 652 aa31.18■■■□□ 2.58
CSNK1E-206ENST00000413574 E2F5Q15329 346 aa31.18■■■□□ 2.58
CSNK1E-206ENST00000413574 CARD9Q9H257 536 aa31.18■■■□□ 2.58
CSNK1E-206ENST00000413574 MSNP26038 577 aaKnown RBP31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 CXCL12P48061 93 aa31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 VASPP50552 380 aaPredicted RBP31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 IL10RBQ08334 325 aa31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 HNRNPA1L2Q32P51 320 aaKnown RBP31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 SEL1L2Q5TEA6 688 aa31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 PTPRN2Q92932 1015 aa31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 HHIPQ96QV1 700 aa31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 LGMNQ99538 433 aa31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 IER2Q9BTL4 223 aa31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 TNKS2Q9H2K2 1166 aa31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 CD248Q9HCU0 757 aa31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 UBA2Q9UBT2 640 aaPredicted RBP31.17■■■□□ 2.58
CSNK1E-206ENST00000413574 ZSCAN5CA6NGD5 496 aaPredicted RBP31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 ZNF821O75541 412 aaPredicted RBP31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 CCDC181Q5TID7 509 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 Q6ZVU0 165 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 CCNYQ8ND76 341 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 P3H4Q92791 437 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 OLFM3Q96PB7 478 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 FAM118BQ9BPY3 351 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 BNIP3LO60238 219 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 SIN3BO75182 1162 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 TMCC1O94876 653 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 TJP3O95049 919 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 FAM182AQ5T1J6 154 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 PRSS16Q9NQE7 514 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 SLC8A2Q9UPR5 921 aa31.16■■■□□ 2.58
CSNK1E-206ENST00000413574 FANCGO15287 622 aa31.15■■■□□ 2.58
CSNK1E-206ENST00000413574 SYNCRIPO60506 623 aaKnown RBP31.15■■■□□ 2.58
CSNK1E-206ENST00000413574 PEX11BO96011 259 aa31.15■■■□□ 2.58
CSNK1E-206ENST00000413574 CCR3P51677 355 aa31.15■■■□□ 2.58
CSNK1E-206ENST00000413574 GEMIN4P57678 1058 aaKnown RBP31.15■■■□□ 2.58
CSNK1E-206ENST00000413574 CYTH1Q15438 398 aa31.15■■■□□ 2.58
CSNK1E-206ENST00000413574 C9orf64Q5T6V5 341 aa31.15■■■□□ 2.58
CSNK1E-206ENST00000413574 C22orf39Q6P5X5 142 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms