RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 HTR7P34969 479 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 BTBD8Q5XKL5 378 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 TRIM68Q6AZZ1 485 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 KIRREL3Q8IZU9 778 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.13■□□□□ 0.33
NUP50-203ENST00000407019 UROC1Q96N76 676 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 FCRL5Q96RD9 977 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 GPR22Q99680 433 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 CATSPERBQ9H7T0 1116 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 ZFYVE28Q9HCC9 887 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 ABCC13Q9NSE7 274 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 NMRK1Q9NWW6 199 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 ANKRD6Q9Y2G4 727 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 PCNTO95613 3336 aa17.13■□□□□ 0.33
NUP50-203ENST00000407019 CCDC78A2IDD5 438 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 MEI4A8MW99 385 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 GOLGA8TH3BQL2 631 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 ANXA9O76027 345 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 APOA4P06727 396 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 ACADSP16219 412 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 HOXC13P31276 330 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 SLC5A3P53794 718 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 DSC3Q14574 896 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 GRM3Q14832 879 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 PCID2Q5JVF3 399 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 SNX30Q5VWJ9 437 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 LZTR1Q8N653 840 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 ACVR1CQ8NER5 493 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 SPATA22Q8NHS9 363 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 CLPTM1LQ96KA5 538 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 CDH19Q9H159 772 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 SMOC2Q9H3U7 446 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 RHOJQ9H4E5 214 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 GLOD4Q9HC38 313 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 SLC39A10Q9ULF5 831 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 SHROOM3Q8TF72 1996 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.12■□□□□ 0.33
NUP50-203ENST00000407019 ARHGEF37A1IGU5 675 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 TRIM13O60858 407 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 TBX10O75333 385 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 PAGE1O75459 146 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 CTGFP29279 349 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 CCR1P32246 355 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 CPOXP36551 454 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 COPAP53621 1224 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 CFAP157Q5JU67 520 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 VWA5B1Q5TIE3 1220 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 MANEALQ5VSG8 457 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 MFSD14CQ5VZR4 134 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 PKN3Q6P5Z2 889 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 NAPRTQ6XQN6 538 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 LRRC74BQ6ZQY2 392 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 RIPOR1Q6ZS17 1223 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 RAPH1Q70E73 1250 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 ZC3HC1Q86WB0 502 aaKnown RBP17.12■□□□□ 0.33
NUP50-203ENST00000407019 SPATA2LQ8IUW3 424 aaPredicted RBP17.12■□□□□ 0.33
NUP50-203ENST00000407019 DTX3LQ8TDB6 740 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 ZNF333Q96JL9 665 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 TSNARE1Q96NA8 513 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 IL12RB2Q99665 862 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 OXCT2Q9BYC2 517 aaPredicted RBP17.12■□□□□ 0.33
NUP50-203ENST00000407019 ZNF212Q9UDV6 495 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 SLC7A8Q9UHI5 535 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 TLK1Q9UKI8 766 aa17.12■□□□□ 0.33
NUP50-203ENST00000407019 LIN7AO14910 233 aaPredicted RBP17.11■□□□□ 0.33
NUP50-203ENST00000407019 CSRP3P50461 194 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 GEMP55040 296 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 PPP2R5DQ14738 602 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 ZNF781Q8N8C0 355 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 IPMKQ8NFU5 416 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 RDH11Q8TC12 318 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 NRG4Q8WWG1 115 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 SUSD3Q96L08 255 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 PPP1R2P1Q96PQ5 205 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 PANX3Q96QZ0 392 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 ADAM2Q99965 735 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 LBHD1Q9BQE6 289 aaPredicted RBP17.11■□□□□ 0.33
NUP50-203ENST00000407019 SLC39A8Q9C0K1 460 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 SFMBT1Q9UHJ3 866 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 MATN3O15232 486 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 MSI1O43347 362 aaKnown RBP17.11■□□□□ 0.33
NUP50-203ENST00000407019 MAFKO60675 156 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 MT-CYBP00156 380 aaPredicted RBP17.11■□□□□ 0.33
NUP50-203ENST00000407019 TYMPP19971 482 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 YY1P25490 414 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 GRIK1P39086 918 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 USP4Q13107 963 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 LPIN1Q14693 890 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 USP10Q14694 798 aaKnown RBP17.11■□□□□ 0.33
NUP50-203ENST00000407019 ZRSR2Q15696 482 aaKnown RBP17.11■□□□□ 0.33
NUP50-203ENST00000407019 C1orf146Q5VVC0 180 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 LMNTD2Q8IXW0 634 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 PLCD3Q8N3E9 789 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 POU5F2Q8N7G0 328 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 PPHLN1Q8NEY8 458 aaKnown RBP17.11■□□□□ 0.33
NUP50-203ENST00000407019 FCRL2Q96LA5 508 aaPredicted RBP17.11■□□□□ 0.33
NUP50-203ENST00000407019 FICDQ9BVA6 458 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 TASP1Q9H6P5 420 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 ANGPTL2Q9UKU9 493 aa17.11■□□□□ 0.33
NUP50-203ENST00000407019 PATJQ8NI35 1801 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms