RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 CMC1Q7Z7K0 106 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 CLEC14AQ86T13 490 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 UMODL1-AS1Q8N2C9 162 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 TTC9BQ8N6N2 239 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 OR6Y1Q8NGX8 325 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 RAET1EQ8TD07 263 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 ZNF778Q96MU6 729 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 TBL1YQ9BQ87 522 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 SIKE1Q9BRV8 207 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 TBC1D10AQ9BXI6 508 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 CLIC5Q9NZA1 410 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 MPP6Q9NZW5 540 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 COPG2Q9UBF2 871 aa9.21□□□□□ -0.94
TDP1-202ENST00000393452 PPARGC1AQ9UBK2 798 aaKnown RBP9.21□□□□□ -0.94
TDP1-202ENST00000393452 HBS1LQ9Y450 684 aaKnown RBP9.21□□□□□ -0.94
TDP1-202ENST00000393452 BRCA2P51587 3418 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 MIA3Q5JRA6 1907 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 IGLV3-10A0A075B6K4 115 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 C2orf71A6NGG8 1288 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 ENPP3O14638 875 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 TIMM44O43615 452 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 NBNO60934 754 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 MOCS2O96007 188 aaPredicted RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 PEX11BO96011 259 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 GNRH1P01148 92 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 HLA-DQB2P05538 268 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 FGFR3P22607 806 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 HADHAP40939 763 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 PAPOLAP51003 745 aaKnown RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 GEMP55040 296 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 TBX4P57082 545 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 RPL10AP62906 217 aaKnown RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 SMAD1Q15797 465 aaKnown RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 CCDC153Q494R4 210 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 CTXN3Q4LDR2 81 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 PCID2Q5JVF3 399 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 ARMC3Q5W041 872 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 PDPK2PQ6A1A2 396 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 PKN3Q6P5Z2 889 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 ZCCHC23Q6ZST2 131 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 CNTN4Q8IWV2 1026 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 PLCD3Q8N3E9 789 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 ATAD1Q8NBU5 361 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 PTCD2Q8WV60 388 aaKnown RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 AZIN2Q96A70 460 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 PRR11Q96HE9 360 aaPredicted RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 VPS39Q96JC1 886 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 GPR62Q9BZJ7 368 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 WWP1Q9H0M0 922 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 ENTPD7Q9NQZ7 604 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 C20orf96Q9NUD7 363 aaPredicted RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 ARL8BQ9NVJ2 186 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 NSMCE4AQ9NXX6 385 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 GMIPQ9P107 970 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 PHF24Q9UPV7 400 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 STK38LQ9Y2H1 464 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 A8MUI8 341 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 FCHO1O14526 889 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 TBC1D4O60343 1298 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 CCDC22O60826 627 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 WFS1O76024 890 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 INHAP05111 366 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 SERPINE1P05121 402 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 MPOP05164 745 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 RHOQP17081 205 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 GRK2P25098 689 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 PSEN1P49768 467 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 CDK7P50613 346 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 NDST2P52849 883 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 IRX4P78413 519 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 ZBTB16Q05516 673 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 MS4A13Q5J8X5 152 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 FAM171A1Q5VUB5 890 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 ZNF280DQ6N043 979 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 POTEHQ6S545 545 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 RANBP10Q6VN20 620 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 FAM43BQ6ZT52 329 aaPredicted RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 TTC7BQ86TV6 843 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 ZC3HC1Q86WB0 502 aaKnown RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 CRIPAKQ8N1N5 446 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 PLD6Q8N2A8 252 aaKnown RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 CAPNS2Q96L46 248 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 CASD1Q96PB1 797 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 GPR22Q99680 433 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 NMUR2Q9GZQ4 415 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 MRM3Q9HC36 420 aaKnown RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 HMX1Q9NP08 348 aaPredicted RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
TDP1-202ENST00000393452 RBM22Q9NW64 420 aaKnown RBP eCLIP9.2□□□□□ -0.94
TDP1-202ENST00000393452 TMEM248Q9NWD8 314 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 MARCH5Q9NX47 278 aa9.2□□□□□ -0.94
TDP1-202ENST00000393452 IPO11Q9UI26 975 aaKnown RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 RPL26L1Q9UNX3 145 aaKnown RBP9.2□□□□□ -0.94
TDP1-202ENST00000393452 CHD5Q8TDI0 1954 aa9.19□□□□□ -0.94
TDP1-202ENST00000393452 CAPN14A8MX76 684 aa9.19□□□□□ -0.94
TDP1-202ENST00000393452 ITM2AO43736 263 aa9.19□□□□□ -0.94
TDP1-202ENST00000393452 RTN3O95197 1032 aaPredicted RBP9.19□□□□□ -0.94
TDP1-202ENST00000393452 VNN2O95498 520 aa9.19□□□□□ -0.94
TDP1-202ENST00000393452 IGLV3-27P01718 113 aa9.19□□□□□ -0.94
TDP1-202ENST00000393452 YWHAQP27348 245 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 534.1 ms