RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 PTPN7P35236 360 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 ECE1P42892 770 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 ABCE1P61221 599 aaKnown RBP9.71□□□□□ -0.85
SF3A3-201ENST00000373019 TRPC3Q13507 836 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 DPYSL3Q14195 570 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 CRY2Q49AN0 593 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 STXBP5Q5T5C0 1151 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 N4BP2L1Q5TBK1 243 aaPredicted RBP9.71□□□□□ -0.85
SF3A3-201ENST00000373019 FAXCQ5TGI0 409 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 SLC16A12Q6ZSM3 486 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 ARMC8Q8IUR7 673 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 FAM178BQ8IXR5 827 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 CBR4Q8N4T8 237 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 FNIP1Q8TF40 1166 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 C2orf49Q9BVC5 232 aaPredicted RBP9.71□□□□□ -0.85
SF3A3-201ENST00000373019 ADAMTS10Q9H324 1103 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 RNPEPQ9H4A4 650 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 UBE4BO95155 1302 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 ERVH48-1M5A8F1 160 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 NOL3O60936 208 aaKnown RBP9.71□□□□□ -0.86
SF3A3-201ENST00000373019 TIPRLO75663 272 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 RFPL2O75678 378 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 BMP4P12644 408 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 JUNBP17275 347 aaPredicted RBP9.71□□□□□ -0.86
SF3A3-201ENST00000373019 CTRB1P17538 263 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 M6PRP20645 277 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 GARTP22102 1010 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 SLC7A1P30825 629 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 EPHX2P34913 555 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 NOVP48745 357 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 RALGDSQ12967 914 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 C9orf131Q5VYM1 1079 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 CTRB2Q6GPI1 263 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 HDAC11Q96DB2 347 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 MARK4Q96L34 752 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 C11orf70Q9BRQ4 267 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 OR2B2Q9GZK3 357 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 ZNF385DQ9H6B1 395 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 WDR55Q9H6Y2 383 aaPredicted RBP9.71□□□□□ -0.86
SF3A3-201ENST00000373019 CPNE5Q9HCH3 593 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 WDR6Q9NNW5 1121 aaKnown RBP9.71□□□□□ -0.86
SF3A3-201ENST00000373019 SNTG2Q9NY99 539 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 MTRRQ9UBK8 725 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 KCNN3Q9UGI6 736 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 SLCO3A1Q9UIG8 710 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 PCDHGC3Q9UN70 934 aa9.71□□□□□ -0.86
SF3A3-201ENST00000373019 DDX60LQ5H9U9 1706 aaKnown RBP9.71□□□□□ -0.86
SF3A3-201ENST00000373019 GOLGA8QA0A0J9YX86 632 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 PNMA6FA0A0J9YX94 578 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 GOLGA8OA6NCC3 632 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 F8VP50 259 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 GOLGA8NF8WBI6 632 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 ASNA1O43681 348 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 ATP2B4P23634 1241 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 KLRK1P26718 216 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 CASP3P42574 277 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 HLCSP50747 726 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 CLCNKBP51801 687 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 DYNLT1P63172 113 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 KCNJ11Q14654 390 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 RFTN1Q14699 578 aaPredicted RBP9.7□□□□□ -0.86
SF3A3-201ENST00000373019 PRR16Q569H4 304 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 TJAP1Q5JTD0 557 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 SNAP47Q5SQN1 464 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 TRMT10BQ6PF06 316 aaKnown RBP9.7□□□□□ -0.86
SF3A3-201ENST00000373019 TTC30BQ8N4P2 665 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 OR2T3Q8NH03 318 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 FIG4Q92562 907 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 MAP6Q96JE9 813 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 POPDC2Q9HBU9 364 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.7□□□□□ -0.86
SF3A3-201ENST00000373019 VAV3Q9UKW4 847 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 TRIM38O00635 465 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 IDH3BO43837 385 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 ALDOAP04075 364 aaKnown RBP9.7□□□□□ -0.86
SF3A3-201ENST00000373019 GRIA1P42261 906 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 NAMPTP43490 491 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 PLA2G16P53816 162 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 YWHAZP63104 245 aaKnown RBP9.7□□□□□ -0.86
SF3A3-201ENST00000373019 ZFYVE27Q5T4F4 411 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 LGSNQ5TDP6 509 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 ADGRF4Q8IZF3 695 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 FAM71DQ8N9W8 422 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 TMC2Q8TDI7 906 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 VPS33AQ96AX1 596 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 NT5C1BQ96P26 610 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 VPS35Q96QK1 796 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 EIF2AK1Q9BQI3 630 aaKnown RBP9.7□□□□□ -0.86
SF3A3-201ENST00000373019 IRF2BPLQ9H1B7 796 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 TCF7L2Q9NQB0 619 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 HOMER2Q9NSB8 354 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 C20orf96Q9NUD7 363 aaPredicted RBP9.7□□□□□ -0.86
SF3A3-201ENST00000373019 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
SF3A3-201ENST00000373019 PCDHGA7Q9Y5G6 932 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 TCAF2A6NFQ2 919 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 H7C0C1 242 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 RNF103O00237 685 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 SNPHO15079 494 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 KRT3P12035 628 aa9.7□□□□□ -0.86
SF3A3-201ENST00000373019 EEF1DP29692 281 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms