RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 GABBR1Q9UBS5 961 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 NXF1Q9UBU9 619 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 VPS51Q9UID3 782 aa11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 RBMX2Q9Y388 322 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 BRCA1P38398 1863 aaKnown RBP11.88□□□□□ -0.51
SMARCA1-201ENST00000371121 GRAP2O75791 330 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 BAIAP3O94812 1187 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 GNL1P36915 607 aaPredicted RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 PRAMEP78395 509 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 AQP6Q13520 282 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 SF3B4Q15427 424 aaKnown RBP eCLIP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 KCNJ8Q15842 424 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 Q3C1V9 767 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 PITRM1Q5JRX3 1037 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 MFSD2AQ8NA29 543 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 CXorf38Q8TB03 319 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 CDCA7Q9BWT1 371 aaPredicted RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 FRMD8Q9BZ67 464 aaPredicted RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 SYBUQ9NX95 663 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 CPQQ9Y646 472 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 CDY2AQ9Y6F7 541 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 CDY1Q9Y6F8 540 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 TRIM38O00635 465 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 BBOX1O75936 387 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 KCNH1O95259 989 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 MGAT1P26572 445 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 CLPPQ16740 277 aaPredicted RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 HADHQ16836 314 aaKnown RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 PPP1R2P3Q6NXS1 205 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 OR13F1Q8NGS4 319 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 ZNF420Q8TAQ5 688 aaPredicted RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 C17orf50Q8WW18 174 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 RPL10LQ96L21 214 aaKnown RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 SERPINI1Q99574 410 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 OSBPL2Q9H1P3 480 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 TDRD3Q9H7E2 651 aaKnown RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 POU2F3Q9UKI9 436 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 TIMM22Q9Y584 194 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 FAM149AA5PLN7 773 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 RSL1D1O76021 490 aaKnown RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 CPNE6O95741 557 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 HSPA1LP34931 641 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 RAB15P59190 212 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 CAMK2BQ13554 666 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 PTK2BQ14289 1009 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 PYCR3Q53H96 274 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 CCDC92Q53HC0 331 aaPredicted RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 GTF2IRD2BQ6EKJ0 949 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 GTF2IRD2Q86UP8 949 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 OFCC1Q8IZS5 231 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 TRUB1Q8WWH5 349 aaKnown RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 HGH1Q9BTY7 390 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 DRC3Q9H069 523 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 C20orf96Q9NUD7 363 aaPredicted RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 CACNA2D2Q9NY47 1150 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 GNPTGQ9UJJ9 305 aa11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 GPC6Q9Y625 555 aaPredicted RBP11.87□□□□□ -0.51
SMARCA1-201ENST00000371121 IQCA1LA6NCM1 817 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 HDAC3O15379 428 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 SLC7A1P30825 629 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 CD68P34810 354 aaPredicted RBP11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 CAP2P40123 477 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 EIF2B2P49770 351 aaKnown RBP11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 NR1D2Q14995 579 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 HERC3Q15034 1050 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 FAM182BQ5T319 152 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 CBR4Q8N4T8 237 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 KDM1BQ8NB78 822 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 CANT1Q8WVQ1 401 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 FKBP10Q96AY3 582 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 CLSTN3Q9BQT9 956 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 DBNDD1Q9H9R9 158 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 VWA7Q9Y334 891 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 NDUFB5O43674 189 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 ICAM1P05362 532 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 HOXC6P09630 235 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 OXTRP30559 389 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 GRSF1Q12849 480 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 CDO1Q16878 200 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 STYK1Q6J9G0 422 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 DSG4Q86SJ6 1040 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 TMEM110Q86TL2 294 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 DDHD1Q8NEL9 900 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 ELOVL4Q9GZR5 314 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 NIF3L1Q9GZT8 377 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 VRTNQ9H8Y1 702 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 TMEM181Q9P2C4 612 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 USP3Q9Y6I4 520 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 USP34Q70CQ2 3546 aa11.86□□□□□ -0.51
SMARCA1-201ENST00000371121 TMEM114B3SHH9 223 aa11.85□□□□□ -0.51
SMARCA1-201ENST00000371121 HSPA4LO95757 839 aa11.85□□□□□ -0.51
SMARCA1-201ENST00000371121 KCNA2P16389 499 aa11.85□□□□□ -0.51
SMARCA1-201ENST00000371121 AXLP30530 894 aa11.85□□□□□ -0.51
SMARCA1-201ENST00000371121 ARCN1P48444 511 aaKnown RBP11.85□□□□□ -0.51
SMARCA1-201ENST00000371121 SELENBP1Q13228 472 aa11.85□□□□□ -0.51
SMARCA1-201ENST00000371121 PDK2Q15119 407 aa11.85□□□□□ -0.51
SMARCA1-201ENST00000371121 PPP1R3AQ16821 1122 aa11.85□□□□□ -0.51
SMARCA1-201ENST00000371121 CYBRD1Q53TN4 286 aa11.85□□□□□ -0.51
SMARCA1-201ENST00000371121 MAP1SQ66K74 1059 aaPredicted RBP11.85□□□□□ -0.51
SMARCA1-201ENST00000371121 KCTD8Q6ZWB6 473 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms