RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CBFA2T2O43439 604 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 BNIP3LO60238 219 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 FSBPO95073 299 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 PPM1JQ5JR12 505 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 PYROXD2Q8N2H3 581 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 AADATQ8N5Z0 425 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 FNIP1Q8TF40 1166 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 EPAS1Q99814 870 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 MRPL47Q9HD33 250 aaKnown RBP28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 DNAI1Q9UI46 699 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 PPM1HQ9ULR3 514 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 NEU3Q9UQ49 428 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 NUMA1Q14980 2115 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 CACNA1AO00555 2505 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 FAM47DPA6NHR8 397 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 K7ERQ8 282 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 ZMPSTE24O75844 475 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 GYPCP04921 128 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 GLDCP23378 1020 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 EPHB2P29323 1055 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 GALCP54803 685 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 UAP1L1Q3KQV9 507 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 KIAA0895LQ68EN5 471 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 BIRC7Q96CA5 298 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 ACE2Q9BYF1 805 aaPredicted RBP28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 ZDHHC5Q9C0B5 715 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 MAGEH1Q9H213 219 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 NDFIP2Q9NV92 336 aa28.24■■■□□ 2.11
ATPAF1-201ENST00000329231 CXorf51AA0A1B0GTR3 108 aa28.23■■■□□ 2.11
ATPAF1-201ENST00000329231 SMAD6O43541 496 aaKnown RBP28.23■■■□□ 2.11
ATPAF1-201ENST00000329231 NCEH1Q6PIU2 408 aa28.23■■■□□ 2.11
ATPAF1-201ENST00000329231 OR2T34Q8NGX1 318 aa28.23■■■□□ 2.11
ATPAF1-201ENST00000329231 C1orf216Q8TAB5 229 aa28.23■■■□□ 2.11
ATPAF1-201ENST00000329231 PIP4K2CQ8TBX8 421 aa28.23■■■□□ 2.11
ATPAF1-201ENST00000329231 MYO1AQ9UBC5 1043 aa28.23■■■□□ 2.11
ATPAF1-201ENST00000329231 SARDHQ9UL12 918 aa28.23■■■□□ 2.11
ATPAF1-201ENST00000329231 HPCAL4Q9UM19 191 aa28.23■■■□□ 2.11
ATPAF1-201ENST00000329231 MED19A0JLT2 244 aaPredicted RBP28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 CREB3O43889 395 aa28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 RAMP2O60895 175 aa28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 RNF8O76064 485 aa28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 CD27P26842 260 aa28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 CASP14P31944 242 aa28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 ACVRL1P37023 503 aa28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 RECQLP46063 649 aaPredicted RBP28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 SERPINH1P50454 418 aaKnown RBP28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 C22orf39Q6P5X5 142 aa28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 RTL3Q8N8U3 475 aaKnown RBP28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 OR2A12Q8NGT7 310 aa28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 OR14C36Q8NHC7 312 aa28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 ARHGEF2Q92974 986 aaKnown RBP28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 CEP44Q9C0F1 390 aa28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 CATSPERBQ9H7T0 1116 aa28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 LAMA1P25391 3075 aa28.22■■■□□ 2.11
ATPAF1-201ENST00000329231 SLC7A4O43246 635 aa28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 HTR7P34969 479 aa28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 DRD3P35462 400 aa28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 ADPRHP54922 357 aa28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 GEMIN4P57678 1058 aaKnown RBP28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 ARF5P84085 180 aa28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 POLD3Q15054 466 aaPredicted RBP28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 MINDY1Q8N5J2 469 aa28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 NCAPGQ9BPX3 1015 aa28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 OSGEPQ9NPF4 335 aa28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 TPX2Q9ULW0 747 aaKnown RBP28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 NYNRINQ9P2P1 1898 aaKnown RBP28.21■■■□□ 2.11
ATPAF1-201ENST00000329231 EIF3CLB5ME19 914 aaKnown RBP28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 OPHN1O60890 802 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 IGHV4-34P06331 123 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 KCNA4P22459 653 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 CHRNA3P32297 505 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 AFF3P51826 1226 aaKnown RBP28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 ZNF252P-AS1Q0IIN9 211 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 GRIK2Q13002 908 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 SEMA3BQ13214 749 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 TRIM14Q14142 442 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 PCDH20Q8N6Y1 951 aaKnown RBP28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 TMIEQ8NEW7 156 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 FAM131CQ96AQ9 280 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 EIF3CQ99613 913 aaKnown RBP28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 TRIM7Q9C029 511 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 DONSONQ9NYP3 566 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 AP4E1Q9UPM8 1137 aa28.2■■■□□ 2.1
ATPAF1-201ENST00000329231 PCDH15Q96QU1 1955 aa28.19■■■□□ 2.1
ATPAF1-201ENST00000329231 FGF10O15520 208 aaPredicted RBP28.19■■■□□ 2.1
ATPAF1-201ENST00000329231 PRPSAP2O60256 369 aa28.19■■■□□ 2.1
ATPAF1-201ENST00000329231 PRNPP04156 253 aa28.19■■■□□ 2.1
ATPAF1-201ENST00000329231 CCR5P51681 352 aa28.19■■■□□ 2.1
ATPAF1-201ENST00000329231 METAP1P53582 386 aa28.19■■■□□ 2.1
ATPAF1-201ENST00000329231 TEAD4Q15561 434 aa28.19■■■□□ 2.1
ATPAF1-201ENST00000329231 ERMARDQ5T6L9 678 aa28.19■■■□□ 2.1
ATPAF1-201ENST00000329231 SPECC1LQ69YQ0 1117 aa28.19■■■□□ 2.1
ATPAF1-201ENST00000329231 TNKS2Q9H2K2 1166 aa28.19■■■□□ 2.1
ATPAF1-201ENST00000329231 KDM4CQ9H3R0 1056 aa28.19■■■□□ 2.1
ATPAF1-201ENST00000329231 PCSK1NQ9UHG2 260 aa28.19■■■□□ 2.1
ATPAF1-201ENST00000329231 WASH4PA8MWX3 477 aa28.18■■■□□ 2.1
ATPAF1-201ENST00000329231 KCNK5O95279 499 aa28.18■■■□□ 2.1
ATPAF1-201ENST00000329231 HNRNPH3P31942 346 aaKnown RBP28.18■■■□□ 2.1
ATPAF1-201ENST00000329231 TPI1P60174 286 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms