RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 LTA4HP09960 611 aaKnown RBP17.47■□□□□ 0.39
GABRB3-202ENST00000311550 HOXD13P35453 343 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 HALP42357 657 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 FRG1Q14331 258 aaKnown RBP17.47■□□□□ 0.39
GABRB3-202ENST00000311550 B4GALNT2Q8NHY0 566 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 EFR3BQ9Y2G0 817 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 GPR25O00155 361 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 HDAC3O15379 428 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 HNRNPRO43390 633 aaKnown RBP17.47■□□□□ 0.39
GABRB3-202ENST00000311550 DNAJB2P25686 324 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 PBLDP30039 288 aaPredicted RBP17.47■□□□□ 0.39
GABRB3-202ENST00000311550 RAB27AP51159 221 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 NUP107P57740 925 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 PPIL2Q13356 520 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 ADGRD1Q6QNK2 874 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 CXCL17Q6UXB2 119 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 TSHZ1Q6ZSZ6 1077 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 TTC7BQ86TV6 843 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 DPY30Q9C005 99 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 IMPAD1Q9NX62 359 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 LGALS13Q9UHV8 139 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 SNUPNO95149 360 aaKnown RBP17.47■□□□□ 0.39
GABRB3-202ENST00000311550 PIRTP0C851 137 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 KIAA2013Q8IYS2 634 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 PARVBQ9HBI1 364 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 MYH2Q9UKX2 1941 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 LRG1P02750 347 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 PMF1Q6P1K2 205 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 CLVS1Q8IUQ0 354 aaPredicted RBP17.46■□□□□ 0.39
GABRB3-202ENST00000311550 A8MX80 341 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 CYP1B1Q16678 543 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 RAP1GAP2Q684P5 730 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 GLMNQ92990 594 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 CFHP08603 1231 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 AKR1A1P14550 325 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 TFEBP19484 476 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 TRIM16LQ309B1 348 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.46■□□□□ 0.39
GABRB3-202ENST00000311550 STK32CQ86UX6 486 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 RAB42Q8N4Z0 105 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 PTGR2Q8N8N7 351 aaPredicted RBP17.46■□□□□ 0.39
GABRB3-202ENST00000311550 SLC4A11Q8NBS3 891 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 ZNF516Q92618 1163 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 MYLPFQ96A32 169 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 WDR55Q9H6Y2 383 aaPredicted RBP17.46■□□□□ 0.39
GABRB3-202ENST00000311550 MYRFQ9Y2G1 1151 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 MAFBQ9Y5Q3 323 aaPredicted RBP17.46■□□□□ 0.39
GABRB3-202ENST00000311550 CLUHO75153 1309 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 RGSL1A5PLK6 1076 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 SCAMP3O14828 347 aaKnown RBP17.46■□□□□ 0.39
GABRB3-202ENST00000311550 VNN1O95497 513 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 LDLRP01130 860 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 ATP5F1P24539 256 aaPredicted RBP17.46■□□□□ 0.39
GABRB3-202ENST00000311550 MRPS15P82914 257 aaKnown RBP17.46■□□□□ 0.39
GABRB3-202ENST00000311550 PPM1JQ5JR12 505 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 HGH1Q9BTY7 390 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 RABGEF1Q9UJ41 708 aa17.46■□□□□ 0.39
GABRB3-202ENST00000311550 MFSD11O43934 449 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 SREBF2Q12772 1141 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 MSLNQ13421 630 aaPredicted RBP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 SDHAF4Q5VUM1 108 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 C9orf57Q5W0N0 161 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 C16orf59Q7L2K0 433 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 TRPC4APQ8TEL6 797 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 PIK3R5Q8WYR1 880 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 OTUB1Q96FW1 271 aaPredicted RBP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 SENP6Q9GZR1 1112 aaPredicted RBP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 COMMD8Q9NX08 183 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 MARCH2Q9P0N8 246 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 MCM8Q9UJA3 840 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 RAP2CQ9Y3L5 183 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 HBS1LQ9Y450 684 aaKnown RBP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 GRIA3P42263 894 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 RAB10P61026 200 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 CCDC15Q0P6D6 951 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 MYPNQ86TC9 1320 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 OR56A4Q8NGH8 313 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 NIFKQ9BYG3 293 aaKnown RBP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 POLR1EQ9GZS1 481 aaKnown RBP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 PRDM16Q9HAZ2 1276 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 SEPT3Q9UH03 358 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 ZNF112Q9UJU3 913 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 PCDHGC3Q9UN70 934 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 COQ4Q9Y3A0 265 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 WDR47O94967 919 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 EGFRP00533 1210 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 PSME3P61289 254 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 PIGWQ7Z7B1 504 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 PATL1Q86TB9 770 aaKnown RBP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 LRRC52Q8N7C0 313 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 RBM15BQ8NDT2 890 aaKnown RBP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 LIMD1Q9UGP4 676 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 MYL4P12829 197 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 FOXN2P32314 431 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 IL5RAQ01344 420 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 PWP1Q13610 501 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 FAM98BQ52LJ0 330 aaKnown RBP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 VSTM1Q6UX27 236 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms