RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 VPS35Q96QK1 796 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 FRMD8P1Q9BZ68 369 aaPredicted RBP17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 MUTP22033 750 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 FBXO47Q5MNV8 452 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 HHIPL2Q6UWX4 724 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 APLFQ8IW19 511 aaPredicted RBP17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 PRRG3Q9BZD7 231 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 CCDC182A6NF36 153 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 TBKBP1A7MCY6 615 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 ENTPD3O75355 529 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 CCDC166P0CW27 439 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 TBX2Q13207 712 aaPredicted RBP17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 RGS21Q2M5E4 152 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 SLC39A12Q504Y0 691 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 GPAT3Q53EU6 434 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 CHST13Q8NET6 341 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 TAS2R13Q9NYV9 303 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 MAT2BQ9NZL9 334 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 CDC40O60508 579 aaKnown RBP eCLIP17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 NOS1APO75052 506 aaPredicted RBP17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 NTSR2O95665 410 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 MYBL2P10244 700 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 HNRNPLP14866 589 aaKnown RBP eCLIP17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 MTX3Q5HYI7 312 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 CDKAL1Q5VV42 579 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 SYT15Q9BQS2 421 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 TOR3AQ9H497 397 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 PDE2AO00408 941 aaPredicted RBP17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 SRSF11Q05519 484 aaKnown RBP17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 OFCC1Q8IZS5 231 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 SLITRK2Q9H156 845 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 STN1Q9H668 368 aaKnown RBP17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 ZNHIT2Q9UHR6 403 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 SERPINF2P08697 491 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 TRAPPC5Q8IUR0 188 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 MOSPD2Q8NHP6 518 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 FAR1Q8WVX9 515 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 FEM1CQ96JP0 617 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 FAM84AQ96KN4 292 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 IKZF3Q9UKT9 509 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 PCDHA3Q9Y5H8 950 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 RNASEH1O60930 286 aaKnown RBP17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 CD86P42081 329 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 FCHO2Q0JRZ9 810 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 CRY1Q16526 586 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 CREG2Q8IUH2 290 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 HERC6Q8IVU3 1022 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 NPAS2Q99743 824 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 PLA2G12BQ9BX93 195 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 TBC1D10AQ9BXI6 508 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 ETNK2Q9NVF9 386 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 PTGFRNQ9P2B2 879 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 GMPPBQ9Y5P6 360 aa17.02■□□□□ 0.32
TSPAN3-201ENST00000267970 ANKDD1BA6NHY2 528 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 ANPEPP15144 967 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 DPEP1P16444 411 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 ABL2P42684 1182 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 RPL14P50914 215 aaKnown RBP17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 NAGLUP54802 743 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 PLD1Q13393 1074 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 KRT74Q7RTS7 529 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 CCDC185Q8N715 623 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 HMG20AQ9NP66 347 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 ABCB9Q9NP78 766 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 PMF1-BGLAPU3KQ54 211 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 CYP4F8P98187 520 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 HSPA14Q0VDF9 509 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 FAM171A1Q5VUB5 890 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 C2orf73Q8N5S3 287 aaPredicted RBP17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 EMILIN2Q9BXX0 1053 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 SLCO1B3Q9NPD5 702 aa17.02■□□□□ 0.31
TSPAN3-201ENST00000267970 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 RGS14O43566 566 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 RFX5P48382 616 aaPredicted RBP17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 EPB41L4BQ9H329 900 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 OPTCQ9UBM4 332 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 POLLQ9UGP5 575 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 H7C4K7 107 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 SLC25A27O95847 323 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 GZMAP12544 262 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 ULK3Q6PHR2 472 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 FBXW8Q8N3Y1 598 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 KCTD4Q8WVF5 259 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 MRPL48Q96GC5 212 aaKnown RBP17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 CAB39LQ9H9S4 337 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 CIDEBQ9UHD4 219 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 A0A087WXM4 84 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 DDTLA6NHG4 134 aaPredicted RBP17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 BIRC5O15392 142 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 SIN3BO75182 1162 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 PRG2P13727 222 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 EPHA3P29320 983 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 GRIA4P48058 902 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 MARCKSL1P49006 195 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 MTAPQ13126 283 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 GLT1D1Q96MS3 346 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 S100A13Q99584 98 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 EURLQ9NYK6 297 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 COX4I1P13073 169 aa17.01■□□□□ 0.31
TSPAN3-201ENST00000267970 CRABP2P29373 138 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms