RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 COLEC11Q9BWP8 271 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 FAM192AQ9GZU8 254 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 OR12D3Q9UGF7 316 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 RAP2CQ9Y3L5 183 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 TREHO43280 583 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 AP1G2O75843 785 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 JCHAINP01591 159 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 APOA4P06727 396 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 SBK3P0C264 359 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 CD1EP15812 388 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 YBX3P16989 372 aaKnown RBP eCLIP15.51■□□□□ 0.07
DDX56-201ENST00000258772 MPSTP25325 297 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 SERPINB5P36952 375 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 XIAPP98170 497 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 CDH17Q12864 832 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 MSLNQ13421 630 aaPredicted RBP15.51■□□□□ 0.07
DDX56-201ENST00000258772 GRB14Q14449 540 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 ANO4Q32M45 955 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 ACAD11Q709F0 780 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 CTU1Q7Z7A3 348 aaKnown RBP15.51■□□□□ 0.07
DDX56-201ENST00000258772 ZMIZ2Q8NF64 920 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 ZSCAN18Q8TBC5 510 aaPredicted RBP15.51■□□□□ 0.07
DDX56-201ENST00000258772 ZFP42Q96MM3 310 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 C1QTNF1Q9BXJ1 281 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 DRC3Q9H069 523 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 TASP1Q9H6P5 420 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 WDR55Q9H6Y2 383 aaPredicted RBP15.51■□□□□ 0.07
DDX56-201ENST00000258772 TMEM30AQ9NV96 361 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 TLK1Q9UKI8 766 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 SNX10Q9Y5X0 201 aa15.51■□□□□ 0.07
DDX56-201ENST00000258772 BTBD19C9JJ37 291 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 TK2O00142 265 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 HDAC3O15379 428 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 THRAP10827 490 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 UQCRBP14927 111 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 RAG1P15918 1043 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 PEX2P28328 305 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 RPL14P50914 215 aaKnown RBP15.5■□□□□ 0.07
DDX56-201ENST00000258772 RAB41Q5JT25 222 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 LIPMQ5VYY2 423 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 ZYG11AQ6WRX3 759 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 ZC3HC1Q86WB0 502 aaKnown RBP15.5■□□□□ 0.07
DDX56-201ENST00000258772 GALNT15Q8N3T1 639 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 RDH11Q8TC12 318 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 DPF3Q92784 378 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 CNDP1Q96KN2 507 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 SENP8Q96LD8 212 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 PPP1R10Q96QC0 940 aaKnown RBP15.5■□□□□ 0.07
DDX56-201ENST00000258772 APBA2Q99767 749 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 WDCPQ9H6R7 721 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 ACSS2Q9NR19 701 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 RNF181Q9P0P0 153 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 ANKRD6Q9Y2G4 727 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 PCNTO95613 3336 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 MYBPHLA2RUH7 354 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 RGSL1A5PLK6 1076 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 H3BNX3 289 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 F9P00740 461 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 TFEBP19484 476 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 PIK3R1P27986 724 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 GRIA4P48058 902 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 AQP4P55087 323 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 MED21Q13503 144 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 MFSD10Q14728 455 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 LSM12Q3MHD2 195 aaKnown RBP15.5■□□□□ 0.07
DDX56-201ENST00000258772 SEL1L3Q68CR1 1132 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 NAPEPLDQ6IQ20 393 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 FAM35AQ86V20 835 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 NPLOC4Q8TAT6 608 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 PCED1BQ96HM7 432 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 EPAS1Q99814 870 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 CCDC28BQ9BUN5 200 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 KIFC1Q9BW19 673 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 RHOJQ9H4E5 214 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 RRN3Q9NYV6 651 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 CACNG4Q9UBN1 327 aa15.5■□□□□ 0.07
DDX56-201ENST00000258772 AIM2O14862 343 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 CASQ2O14958 399 aaPredicted RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 CABYRO75952 493 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 LRIG2O94898 1065 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 PIGNO95427 931 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 SAT1P21673 171 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 EPHA3P29320 983 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 CCR10P46092 362 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 PGGT1BP53609 377 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 PRPSAP1Q14558 356 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 USP10Q14694 798 aaKnown RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 TRIP10Q15642 601 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 ARL13AQ5H913 290 aaPredicted RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 PRAMEF19Q5SWL8 479 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 TWF2Q6IBS0 349 aaKnown RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 OTOP3Q7RTS5 596 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 ZC3H15Q8WU90 426 aaKnown RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 EDEM1Q92611 657 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 PPP1R36Q96LQ0 422 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 TKTL2Q9H0I9 626 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 TSPYL2Q9H2G4 693 aaPredicted RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 NSMCE4AQ9NXX6 385 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 CCDC78A2IDD5 438 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 AP3B1O00203 1094 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms