RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 CLCN6P51797 869 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 METAP1P53582 386 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 SLC20A2Q08357 652 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 SMTNL2Q2TAL5 461 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 POM121L1PQ3SYA9 428 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 PPP6R3Q5H9R7 873 aaPredicted RBP18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 TXNRD3NBQ6F5E7 133 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 ZNF354CQ86Y25 554 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 AADATQ8N5Z0 425 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 NIPA2Q8N8Q9 360 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 CADM4Q8NFZ8 388 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 OR2A12Q8NGT7 310 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 FOXJ1Q92949 421 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 MRFAP1L1Q96HT8 127 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 BTBD1Q9H0C5 482 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 C6orf106Q9H6K1 298 aaPredicted RBP18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 SCML1Q9UN30 329 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 NCKAP1Q9Y2A7 1128 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 ABCA7Q8IZY2 2146 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 EML5Q05BV3 1969 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 EIF3CLB5ME19 914 aaKnown RBP18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 RASA4BC9J798 803 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 MCF2LO15068 1137 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 FGF10O15520 208 aaPredicted RBP18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 DAPK3O43293 454 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 RASA4O43374 803 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 ZNF821O75541 412 aaPredicted RBP18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 RNASEH2AO75792 299 aaKnown RBP18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 CD160O95971 181 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 TMEM253P0C7T8 217 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 GOT1P17174 413 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 C5AR1P21730 350 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 HTR7P34969 479 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 AASDHQ4L235 1098 aaPredicted RBP18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 BOLA3Q53S33 107 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 C22orf39Q6P5X5 142 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 RFX8Q6ZV50 586 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 USP30Q70CQ3 517 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 DSG4Q86SJ6 1040 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 CPNE8Q86YQ8 564 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 PSTKQ8IV42 348 aaKnown RBP18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 RGL4Q8IZJ4 473 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 UMODL1-AS1Q8N2C9 162 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 HDDC3Q8N4P3 179 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 HSPH1Q92598 858 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 HMCESQ96FZ2 354 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 EIF3CQ99613 913 aaKnown RBP18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 OMDQ99983 421 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 KLC2Q9H0B6 622 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 NEUROG2Q9H2A3 272 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 PPM1HQ9ULR3 514 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 HPCAL4Q9UM19 191 aa18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 FCF1Q9Y324 198 aaKnown RBP18.34■□□□□ 0.53
SNRPA1-201ENST00000254193 ZNF292O60281 2723 aa18.33■□□□□ 0.53
SNRPA1-201ENST00000254193 METTL12A8MUP2 240 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 MEI4A8MW99 385 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 PRR5-ARHGAP8B1AHC4 643 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 PLK4O00444 970 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 KHNYNO15037 678 aaKnown RBP18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 KDELR3O43731 214 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 FOXD2O60548 495 aaPredicted RBP18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 SEMA4FO95754 770 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 ADH1BP00325 375 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 RARAP10276 462 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 SSR1P43307 286 aaKnown RBP18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 DNA2P51530 1060 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 YBEYP58557 167 aaPredicted RBP18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 IRX4P78413 519 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 ARHGAP8P85298 464 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 RSPO4Q2I0M5 234 aaPredicted RBP18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 TRIM61Q5EBN2 209 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 WDR45BQ5MNZ6 344 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 SYCP2LQ5T4T6 812 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 CHST14Q8NCH0 376 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 PIP4K2CQ8TBX8 421 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 RMDN1Q96DB5 314 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 CELF6Q96J87 481 aaKnown RBP18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 SGK2Q9HBY8 427 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 CWC15Q9P013 229 aaKnown RBP18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 UVRAGQ9P2Y5 699 aa18.33■□□□□ 0.52
SNRPA1-201ENST00000254193 WDR87Q6ZQQ6 2873 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 FAM47DPA6NHR8 397 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 ALOX15BO15296 676 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 BUB1O43683 1085 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 CFIP05156 583 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 CTSLP07711 333 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 ERCC2P18074 760 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 CHRNA3P32297 505 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 HCAR3P49019 387 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 SLC25A11Q02978 314 aaKnown RBP18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 SFSWAPQ12872 951 aaKnown RBP18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 DPYSL2Q16555 572 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 PARP15Q460N3 678 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 DCAF12L1Q5VU92 463 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 PEAR1Q5VY43 1037 aaPredicted RBP18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 DPY19L3Q6ZPD9 716 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 NETO2Q8NC67 525 aa18.32■□□□□ 0.52
SNRPA1-201ENST00000254193 CCDC114Q96M63 670 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms