RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 MRPS23Q9Y3D9 190 aaKnown RBP17.67■□□□□ 0.42
PHGDH-234ENST00000642041 IGLV3-25P01717 112 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 FYNP06241 537 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 OR4Q2P0C623 313 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 CSH1P0DML2 217 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 CSH2P0DML3 217 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 HOXA6P31267 233 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 HSD17B3P37058 310 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 ITGA8P53708 1063 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 ARPP19P56211 112 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 ADCY2Q08462 1091 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 NME3Q13232 169 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 SLC45A4Q5BKX6 768 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 PLA2G2CQ5R387 149 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 SYPL2Q5VXT5 272 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 ZDHHC24Q6UX98 284 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 WDR5BQ86VZ2 330 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 FAM131BQ86XD5 332 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 DDX42Q86XP3 938 aaKnown RBP eCLIP17.66■□□□□ 0.42
PHGDH-234ENST00000642041 PCDH19Q8TAB3 1148 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 ZNF461Q8TAF7 563 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 TFB1MQ8WVM0 346 aaKnown RBP17.66■□□□□ 0.42
PHGDH-234ENST00000642041 IRF7Q92985 503 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 UXTQ9UBK9 157 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-234ENST00000642041 TLR6Q9Y2C9 796 aa17.66■□□□□ 0.42
PHGDH-234ENST00000642041 MAST4O15021 2626 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 MTMR11A4FU01 709 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 C5orf60A6NFR6 353 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 GIPC1O14908 333 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 CHADO15335 359 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 IRAK2O43187 625 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 GCATO75600 419 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 SPAG6O75602 509 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 FDFT1P37268 417 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 ARL4CP56559 192 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 TPI1P60174 286 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 DYNLT1P63172 113 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 MRPS25P82663 173 aaKnown RBP17.65■□□□□ 0.42
PHGDH-234ENST00000642041 GPS1Q13098 491 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 EIF4EBP2Q13542 120 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-234ENST00000642041 VEPH1Q14D04 833 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 CCDC142Q17RM4 750 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 ZC3H12AQ5D1E8 599 aaKnown RBP17.65■□□□□ 0.42
PHGDH-234ENST00000642041 RNF43Q68DV7 783 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 KLHDC10Q6PID8 442 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 POTEHQ6S545 545 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 ATP6V0D2Q8N8Y2 350 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 STKLD1Q8NE28 680 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 LRRC39Q96DD0 335 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 HERPUD2Q9BSE4 406 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 TMEM121Q9BTD3 319 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 TRMT61BQ9BVS5 477 aaKnown RBP17.65■□□□□ 0.42
PHGDH-234ENST00000642041 TTLL2Q9BWV7 592 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 ZNF334Q9HCZ1 680 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-234ENST00000642041 HAUS2Q9NVX0 235 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 CWC15Q9P013 229 aaKnown RBP17.65■□□□□ 0.42
PHGDH-234ENST00000642041 ATP8A1Q9Y2Q0 1164 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 PIAS3Q9Y6X2 628 aa17.65■□□□□ 0.42
PHGDH-234ENST00000642041 PSMD3O43242 534 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 IFNB1P01574 187 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 APOEP02649 317 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 ABHD2P08910 425 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 CD48P09326 243 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 FAM153BP0C7A2 387 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 ELF1P32519 619 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 OR1D2P34982 312 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 PHBP35232 272 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 GGCXP38435 758 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 RAB33AQ14088 237 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 GRM2Q14416 872 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 MGAT5BQ3V5L5 792 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 FAM153CQ494X1 144 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 AGBL2Q5U5Z8 902 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 SNX30Q5VWJ9 437 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 ARMC3Q5W041 872 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 RFX8Q6ZV50 586 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 BHLHA9Q7RTU4 235 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 UNC45BQ8IWX7 931 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 PDIK1LQ8N165 341 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 RIBC1Q8N443 379 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-234ENST00000642041 PQLC3Q8N755 202 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 DQX1Q8TE96 717 aaKnown RBP17.64■□□□□ 0.41
PHGDH-234ENST00000642041 ZIM3Q96PE6 472 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 KCTD15Q96SI1 283 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-234ENST00000642041 SCNM1Q9BWG6 230 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 PIGVQ9NUD9 493 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 FAM153AQ9UHL3 310 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 ASB3Q9Y575 518 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 PCDHGA5Q9Y5G8 931 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 LAMA5O15230 3695 aa17.64■□□□□ 0.41
PHGDH-234ENST00000642041 WDR27A2RRH5 827 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 GOLGA6CA6NDK9 693 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 OPHN1O60890 802 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 TCEA3O75764 348 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 TTC4O95801 387 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 TOP3BO95985 862 aaKnown RBP17.63■□□□□ 0.41
PHGDH-234ENST00000642041 GSTA2P09210 222 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 GOLGA6DP0CG33 693 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 FCARP24071 287 aa17.63■□□□□ 0.41
PHGDH-234ENST00000642041 OAS2P29728 719 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms