RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 STK17AQ9UEE5 414 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 INTS6Q9UL03 887 aaKnown RBP11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 NF1P21359 2839 aa11.35□□□□□ -0.59
PTP4A1-207ENST00000639568 CSMD1Q96PZ7 3565 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 PRR19A6NJB7 356 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 D6RAR5 112 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 STMND1H3BQB6 276 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 DDAH2O95865 285 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 CYP2J2P51589 502 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 SLC8A3P57103 927 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 SEPT6Q14141 434 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 FZD2Q14332 565 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 SGSM1Q2NKQ1 1148 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 CAPRIN2Q6IMN6 1127 aaKnown RBP11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 GCNT7Q6ZNI0 430 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 HORMAD1Q86X24 394 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 SLC35F3Q8IY50 421 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 IL22RA1Q8N6P7 574 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 BTN2A2Q8WVV5 523 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 DNAJC19Q96DA6 116 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 ABHD17AQ96GS6 310 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 LMLNQ96KR4 655 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 CMKLR1Q99788 373 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 DDX50Q9BQ39 737 aaKnown RBP11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 NT5C1AQ9BXI3 368 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 SPASTQ9UBP0 616 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 CCDC39Q9UFE4 941 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 SFMBT1Q9UHJ3 866 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 SARDHQ9UL12 918 aa11.34□□□□□ -0.59
PTP4A1-207ENST00000639568 SPTY2D1-AS1A0A0U1RR47 76 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 GOLGA6L7A0A1B0GV03 622 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 PCDH8O95206 1070 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 ZBED1O96006 694 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 RPLP0P05388 317 aaKnown RBP11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 ANXA6P08133 673 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 VAV1P15498 845 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 SLC6A4P31645 630 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 CCKBRP32239 447 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 AP3M2P53677 418 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 FGL2Q14314 439 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 ZNF284Q2VY69 593 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 ACCSLQ4AC99 568 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 MMS22LQ6ZRQ5 1243 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 FAM114A1Q8IWE2 563 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 UNC45BQ8IWX7 931 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 XXYLT1Q8NBI6 393 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 GALNT11Q8NCW6 608 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 AKAP7Q9P0M2 348 aaPredicted RBP11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 GULP1Q9UBP9 304 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 LIMCH1Q9UPQ0 1083 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 CACNA1DQ01668 2161 aa11.33□□□□□ -0.6
PTP4A1-207ENST00000639568 ZNF891A8MT65 544 aaPredicted RBP11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 MSI1O43347 362 aaKnown RBP11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 SEMA7AO75326 666 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 CNTN5O94779 1100 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 PRKCGP05129 697 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 RABIFP47224 123 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 STK19P49842 368 aaPredicted RBP11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 TKTL1P51854 596 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 ADKP55263 362 aaKnown RBP11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 CCL7P80098 99 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 KRTAP21-3Q3LHN1 58 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 PRRT3Q5FWE3 981 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 FSCBQ5H9T9 825 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 RRAGBQ5VZM2 374 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 CCDC65Q8IXS2 484 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 GPBAR1Q8TDU6 330 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 APOBEC4Q8WW27 367 aaKnown RBP11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 SCG3Q8WXD2 468 aaKnown RBP11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 EDEM1Q92611 657 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 RNF34Q969K3 372 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 HEXIM2Q96MH2 286 aaKnown RBP11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 CPEB1Q9BZB8 566 aaKnown RBP11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 AGPAT3Q9NRZ7 376 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 PPM1HQ9ULR3 514 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 DOLKQ9UPQ8 538 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 HS3ST3A1Q9Y663 406 aa11.32□□□□□ -0.6
PTP4A1-207ENST00000639568 EFCAB7A8K855 629 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 C9orf172C9J069 976 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 LMO7DNF2Z398 122 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 CLIC2O15247 247 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 ACSL4O60488 711 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 RPN1P04843 607 aaKnown RBP11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 CASP4P49662 377 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 TAS2R38P59533 333 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 RPS24P62847 133 aaKnown RBP11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 SULT2A1Q06520 285 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 C1orf61Q13536 156 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 PDE1CQ14123 709 aaPredicted RBP11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 NAA30Q147X3 362 aaPredicted RBP11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 FAM133BQ5BKY9 247 aaKnown RBP11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 PPP1R26Q5T8A7 1209 aaPredicted RBP11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 NUGGCQ68CJ6 796 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 KYAT3Q6YP21 454 aaKnown RBP11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 SV2AQ7L0J3 742 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 SDR16C5Q8N3Y7 309 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 TAF4BQ92750 862 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 CCDC74AQ96AQ1 378 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 RNF25Q96BH1 459 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms