RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 PCDHGA11Q9Y5H2 935 aa11.89□□□□□ -0.51
LINC00538-201ENST00000626109 SNX9Q9Y5X1 595 aa11.89□□□□□ -0.51
LINC00538-201ENST00000626109 ZFP37Q9Y6Q3 630 aaPredicted RBP11.89□□□□□ -0.51
LINC00538-201ENST00000626109 LINC01553A4QN01 128 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 NT5C1B-RDH14C9J2C7 533 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 CA3P07451 260 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 MYOGP15173 224 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 ZNF267Q14586 743 aaPredicted RBP11.88□□□□□ -0.51
LINC00538-201ENST00000626109 CTC1Q2NKJ3 1217 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 METTL11BQ5VVY1 283 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 PLEKHM3Q6ZWE6 761 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 CCDC50Q8IVM0 306 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 SLC39A11Q8N1S5 342 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 TRIML2Q8N7C3 387 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 MOSPD2Q8NHP6 518 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 TMEM169Q96HH4 297 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 FAXDC2Q96IV6 333 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 SELENOSQ9BQE4 189 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 HERC2P3Q9BVR0 1158 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 UNKQ9C0B0 810 aaKnown RBP11.88□□□□□ -0.51
LINC00538-201ENST00000626109 APOBEC3GQ9HC16 384 aaKnown RBP11.88□□□□□ -0.51
LINC00538-201ENST00000626109 GDAP2Q9NXN4 497 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 SPG21Q9NZD8 308 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 FAM8A1Q9UBU6 413 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 STK39Q9UEW8 545 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 SF3B1O75533 1304 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC00538-201ENST00000626109 A0A1W2PPC1 479 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 F8W810 466 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 GAS8O95995 478 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 ITGB1P05556 798 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 RARAP10276 462 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 ODC1P11926 461 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 KRT5P13647 590 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 TBXAS1P24557 533 aaPredicted RBP11.88□□□□□ -0.51
LINC00538-201ENST00000626109 CTNNB1P35222 781 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 BRCC3P46736 316 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 MNAT1P51948 309 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 ELAVL2Q12926 359 aaKnown RBP11.88□□□□□ -0.51
LINC00538-201ENST00000626109 CLEC16AQ2KHT3 1053 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 SGO2Q562F6 1265 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 AADACL2Q6P093 401 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 FUT10Q6P4F1 479 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 SCARA5Q6ZMJ2 495 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 CEP128Q6ZU80 1094 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 AADATQ8N5Z0 425 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 CCDC197Q8NCU1 140 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 BBOF1Q8ND07 529 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 DENND1AQ8TEH3 1009 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 KAT5Q92993 513 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 ELMO3Q96BJ8 720 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 IGSF21Q96ID5 467 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 SUSD3Q96L08 255 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 SENP8Q96LD8 212 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 SAMD11Q96NU1 681 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 PBX4Q9BYU1 374 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 EPB41L4BQ9H329 900 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 NCOR1P1Q9H4R4 102 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 INTS9Q9NV88 658 aaKnown RBP11.88□□□□□ -0.51
LINC00538-201ENST00000626109 SAMD15Q9P1V8 674 aa11.88□□□□□ -0.51
LINC00538-201ENST00000626109 YBX2Q9Y2T7 364 aaKnown RBP11.88□□□□□ -0.51
LINC00538-201ENST00000626109 CYB561D2O14569 222 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 HUS1O60921 280 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 USP1O94782 785 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 SHBGP04278 402 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 LINC00271P0C7V0 271 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 CHN1P15882 459 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 DRD4P21917 467 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 BMPR1AP36894 532 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 PBX2P40425 430 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 MARCKSL1P49006 195 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 TKTL1P51854 596 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 RELQ04864 619 aaPredicted RBP11.87□□□□□ -0.51
LINC00538-201ENST00000626109 CUL2Q13617 745 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 TEAD4Q15561 434 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 CLPPQ16740 277 aaPredicted RBP11.87□□□□□ -0.51
LINC00538-201ENST00000626109 TIGD5Q53EQ6 642 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 LACTB2Q53H82 288 aaPredicted RBP11.87□□□□□ -0.51
LINC00538-201ENST00000626109 LIN9Q5TKA1 542 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 RPUSD3Q6P087 351 aaKnown RBP11.87□□□□□ -0.51
LINC00538-201ENST00000626109 TTC27Q6P3X3 843 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 WDR73Q6P4I2 378 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 CD300LGQ6UXG3 332 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 TMEM173Q86WV6 379 aaPredicted RBP11.87□□□□□ -0.51
LINC00538-201ENST00000626109 CCDC13Q8IYE1 715 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 FAM156AQ8NDB6 213 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 CHFRQ96EP1 664 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 KCNK17Q96T54 332 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 CRLF2Q9HC73 371 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 CRTAC1Q9NQ79 661 aa11.87□□□□□ -0.51
LINC00538-201ENST00000626109 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.86□□□□□ -0.51
LINC00538-201ENST00000626109 I3L4J1 428 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 ATMINO43313 823 aaPredicted RBP11.86□□□□□ -0.51
LINC00538-201ENST00000626109 CYP2A6P11509 494 aaPredicted RBP11.86□□□□□ -0.51
LINC00538-201ENST00000626109 CKMT1AP12532 417 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 IGFBP6P24592 240 aaPredicted RBP11.86□□□□□ -0.51
LINC00538-201ENST00000626109 GNL1P36915 607 aaPredicted RBP11.86□□□□□ -0.51
LINC00538-201ENST00000626109 CETN2P41208 172 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 ASPAP45381 313 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 CCNHP51946 323 aaPredicted RBP11.86□□□□□ -0.51
LINC00538-201ENST00000626109 YWHAEP62258 255 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms