RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 VAT1Q99536 393 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 FDXACB1Q9BRP7 624 aaPredicted RBP14.87□□□□□ -0.03
VPS36-207ENST00000611132 DGCR6LQ9BY27 220 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 MID1IP1Q9NPA3 183 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 EXOSC4Q9NPD3 245 aaKnown RBP14.87□□□□□ -0.03
VPS36-207ENST00000611132 VPS45Q9NRW7 570 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 ARHGAP28Q9P2N2 729 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 XPR1Q9UBH6 696 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 PCDHGC3Q9UN70 934 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 WDR47O94967 919 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 CACNB2Q08289 660 aaPredicted RBP14.87□□□□□ -0.03
VPS36-207ENST00000611132 SIX1Q15475 284 aaPredicted RBP14.87□□□□□ -0.03
VPS36-207ENST00000611132 TRMT10BQ6PF06 316 aaKnown RBP14.87□□□□□ -0.03
VPS36-207ENST00000611132 CACYBPQ9HB71 228 aaKnown RBP14.87□□□□□ -0.03
VPS36-207ENST00000611132 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 AOC1P19801 751 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 JAK1P23458 1154 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 IVDP26440 423 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 SLC7A2P52569 658 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 RPL26P61254 145 aaKnown RBP14.86□□□□□ -0.03
VPS36-207ENST00000611132 CAPSQ13938 189 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 DGUOKQ16854 277 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 MSS51Q4VC12 460 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 ZDHHC13Q8IUH4 622 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 CELF6Q96J87 481 aaKnown RBP14.86□□□□□ -0.03
VPS36-207ENST00000611132 OMDQ99983 421 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 ZNF395Q9H8N7 513 aaPredicted RBP14.86□□□□□ -0.03
VPS36-207ENST00000611132 PCDHB12Q9Y5F1 795 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 TCF4P15884 667 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 RUNX1T1Q06455 604 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 ENPEPQ07075 957 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 SFT2D3Q587I9 215 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 NOTUMQ6P988 496 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 KLHDC10Q6PID8 442 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 COX4I2Q96KJ9 171 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 PRKD2Q9BZL6 878 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 NDEL1Q9GZM8 345 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 CAB39LQ9H9S4 337 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 TMEM216Q9P0N5 145 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 NPM3O75607 178 aaKnown RBP14.86□□□□□ -0.03
VPS36-207ENST00000611132 TIPRLO75663 272 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 GSNP06396 782 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 ADIGQ0VDE8 80 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 KLF1Q13351 362 aaPredicted RBP14.86□□□□□ -0.03
VPS36-207ENST00000611132 PERM1Q5SV97 790 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 FAM83AQ86UY5 434 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 SLC41A1Q8IVJ1 513 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 CENPLQ8N0S6 344 aaPredicted RBP14.86□□□□□ -0.03
VPS36-207ENST00000611132 PLEKHO2Q8TD55 490 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 VPS33AQ96AX1 596 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 FAM136AQ96C01 138 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 RGPD2P0DJD1 1756 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 A0A087X1B8 175 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 EVPLLA8MZ36 301 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 ASLP04424 464 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 FKBP1AP62942 108 aaKnown RBP14.86□□□□□ -0.03
VPS36-207ENST00000611132 GAD2Q05329 585 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 TXNRD3NBQ6F5E7 133 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 CNTD1Q8N815 330 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 ZNF781Q8N8C0 355 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 MYOZ2Q9NPC6 264 aa14.86□□□□□ -0.03
VPS36-207ENST00000611132 PCSK1P29120 753 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 RAD51Q06609 339 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 CCDC80Q76M96 950 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 C8orf59Q8N0T1 100 aaPredicted RBP14.85□□□□□ -0.03
VPS36-207ENST00000611132 DEFB129Q9H1M3 183 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 CASS4Q9NQ75 786 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 DOLKQ9UPQ8 538 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 MYH3P11055 1940 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 ASNA1O43681 348 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 NFICP08651 508 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 GOT1P17174 413 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 TFEBP19484 476 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 ADSLP30566 484 aaPredicted RBP14.85□□□□□ -0.03
VPS36-207ENST00000611132 SLC26A2P50443 739 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 GBE1Q04446 702 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 TIGD7Q6NT04 549 aaPredicted RBP14.85□□□□□ -0.03
VPS36-207ENST00000611132 TREML1Q86YW5 311 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 GJD4Q96KN9 370 aaPredicted RBP14.85□□□□□ -0.03
VPS36-207ENST00000611132 RBM22Q9NW64 420 aaKnown RBP eCLIP14.85□□□□□ -0.03
VPS36-207ENST00000611132 UGT1A9O60656 530 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 FBXO21O94952 628 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 ZNF484Q5JVG2 852 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 TTC23Q5W5X9 447 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 AGBL3Q8NEM8 1001 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 DNERQ8NFT8 737 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 BLOC1S5Q8TDH9 187 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 LPGAT1Q92604 370 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 ABHD8Q96I13 439 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 ACO2Q99798 780 aaKnown RBP14.85□□□□□ -0.03
VPS36-207ENST00000611132 UGT1A7Q9HAW7 530 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 UGT1A10Q9HAW8 530 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 UGT1A8Q9HAW9 530 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 PARVBQ9HBI1 364 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 SYTL2Q9HCH5 934 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 ZC4H2Q9NQZ6 224 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 TKTL1P51854 596 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 BNIP2Q12982 314 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 PPIL2Q13356 520 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 TRAF7Q6Q0C0 670 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms