RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 CLCN6P51797 869 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 DRG2P55039 364 aaKnown RBP18.99■□□□□ 0.63
SSBP4-212ENST00000601919 SLC7A5Q01650 507 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 GUCY2DQ02846 1103 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 HTR4Q13639 388 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 TMCO4Q5TGY1 634 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 ARHGEF18Q6ZSZ5 1173 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 B4GALNT4Q76KP1 1039 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 ZNF599Q96NL3 588 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 TRIM51Q9BSJ1 452 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 FEM1AQ9BSK4 669 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 C2orf49Q9BVC5 232 aaPredicted RBP18.99■□□□□ 0.63
SSBP4-212ENST00000601919 EBF3Q9H4W6 596 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 FAM114A2Q9NRY5 505 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 VPS28Q9UK41 221 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 NEU2Q9Y3R4 380 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 A0A0A0MRY4 1105 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 A0A0D9SEW6 157 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 CACNG3O60359 315 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 PRAMEF11O60813 436 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 CCNB1P14635 433 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 ACVRL1P37023 503 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 PLK1P53350 603 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 GDF10P55107 478 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 GEMIN4P57678 1058 aaKnown RBP18.98■□□□□ 0.63
SSBP4-212ENST00000601919 IFI35P80217 286 aaPredicted RBP18.98■□□□□ 0.63
SSBP4-212ENST00000601919 MRPS25P82663 173 aaKnown RBP18.98■□□□□ 0.63
SSBP4-212ENST00000601919 HNRNPDQ14103 355 aaKnown RBP18.98■□□□□ 0.63
SSBP4-212ENST00000601919 DMC1Q14565 340 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 TRIP13Q15645 432 aaPredicted RBP18.98■□□□□ 0.63
SSBP4-212ENST00000601919 SMAD2Q15796 467 aaKnown RBP18.98■□□□□ 0.63
SSBP4-212ENST00000601919 TRIM68Q6AZZ1 485 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 BBS5Q8N3I7 341 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 DCAF4L2Q8NA75 395 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 OR7D4Q8NG98 312 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 LRRN4Q8WUT4 740 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 FGF14Q92915 247 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 ZFYVE19Q96K21 471 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 SPATA13Q96N96 652 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 ACE2Q9BYF1 805 aaPredicted RBP18.98■□□□□ 0.63
SSBP4-212ENST00000601919 ECT2Q9H8V3 914 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 EPB41L5Q9HCM4 733 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 DMGDHQ9UI17 866 aaKnown RBP18.98■□□□□ 0.63
SSBP4-212ENST00000601919 NUMBLQ9Y6R0 609 aa18.98■□□□□ 0.63
SSBP4-212ENST00000601919 CXorf51AA0A1B0GTR3 108 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 KCNK1O00180 336 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 ARSAP15289 507 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 GDI1P31150 447 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 CSKP41240 450 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 LMAN2Q12907 356 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 GPS1Q13098 491 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 CUL1Q13616 776 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 RUNX3Q13761 415 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 GRM2Q14416 872 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 RFTN1Q14699 578 aaPredicted RBP18.97■□□□□ 0.63
SSBP4-212ENST00000601919 TEX44Q53QW1 395 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 FSCBQ5H9T9 825 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 MARC1Q5VT66 337 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 DUPD1Q68J44 220 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 ITPRIPL1Q6GPH6 555 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 ARHGAP36Q6ZRI8 547 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 PCGF5Q86SE9 256 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 SEC14L1Q92503 715 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 ACDQ96AP0 544 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 ASIC4Q96FT7 647 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 SNF8Q96H20 258 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 PLA2G2FQ9BZM2 168 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 FAM129AQ9BZQ8 928 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 ANKZF1Q9H8Y5 726 aa18.97■□□□□ 0.63
SSBP4-212ENST00000601919 KLHL8Q9P2G9 620 aaPredicted RBP18.97■□□□□ 0.63
SSBP4-212ENST00000601919 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.96■□□□□ 0.63
SSBP4-212ENST00000601919 CBX4O00257 560 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 SP100P23497 879 aaPredicted RBP18.96■□□□□ 0.63
SSBP4-212ENST00000601919 PTPN3P26045 913 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 MZF1P28698 734 aaPredicted RBP18.96■□□□□ 0.63
SSBP4-212ENST00000601919 RPL22P35268 128 aaKnown RBP18.96■□□□□ 0.63
SSBP4-212ENST00000601919 VPS41P49754 854 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 SULT2A1Q06520 285 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 WASHC5Q12768 1159 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 CALCOCO2Q13137 446 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 ELF2Q15723 593 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 PREPLQ4J6C6 727 aaPredicted RBP18.96■□□□□ 0.63
SSBP4-212ENST00000601919 ANKRD20A2Q5SQ80 823 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 ANKRD20A1Q5TYW2 823 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 ANKRD20A3Q5VUR7 823 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 PTCRAQ6ISU1 281 aaPredicted RBP18.96■□□□□ 0.63
SSBP4-212ENST00000601919 RETSATQ6NUM9 610 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 METTL3Q86U44 580 aaKnown RBP18.96■□□□□ 0.63
SSBP4-212ENST00000601919 OR52K2Q8NGK3 314 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 CCDC110Q8TBZ0 833 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 WFDC5Q8TCV5 224 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 MAML1Q92585 1016 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 PPP1R2P1Q96PQ5 205 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 TRIM31Q9BZY9 425 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 BRD9Q9H8M2 597 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 ABCB8Q9NUT2 735 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 WHRNQ9P202 907 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 IGSF9Q9P2J2 1179 aa18.96■□□□□ 0.63
SSBP4-212ENST00000601919 UBA2Q9UBT2 640 aaPredicted RBP18.96■□□□□ 0.63
SSBP4-212ENST00000601919 OR51B4Q9Y5P0 310 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms