RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 MCUQ8NE86 351 aa18.28■□□□□ 0.52
EIF4A1-216ENST00000580888 DEPDC1BQ8WUY9 529 aa18.28■□□□□ 0.52
EIF4A1-216ENST00000580888 TFB1MQ8WVM0 346 aaKnown RBP18.28■□□□□ 0.52
EIF4A1-216ENST00000580888 E2F7Q96AV8 911 aa18.28■□□□□ 0.52
EIF4A1-216ENST00000580888 CLDN23Q96B33 292 aa18.28■□□□□ 0.52
EIF4A1-216ENST00000580888 ZSWIM3Q96MP5 696 aa18.28■□□□□ 0.52
EIF4A1-216ENST00000580888 EPAS1Q99814 870 aa18.28■□□□□ 0.52
EIF4A1-216ENST00000580888 FRMD8Q9BZ67 464 aaPredicted RBP18.28■□□□□ 0.52
EIF4A1-216ENST00000580888 BRD8Q9H0E9 1235 aa18.28■□□□□ 0.52
EIF4A1-216ENST00000580888 TCRBV7S3A2A0A539 114 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 NCAM2O15394 837 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 CREB3O43889 395 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 VAV1P15498 845 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 PSMC3P17980 439 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 YWHAQP27348 245 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 CCR1P32246 355 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 ALDH1A3P47895 512 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 NRLP54845 237 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 TPI1P60174 286 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 RPL10AP62906 217 aaKnown RBP18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 IFFO1Q0D2I5 559 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 KRT71Q3SY84 523 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 SDHAF4Q5VUM1 108 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 VITQ6UXI7 678 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 CENPUQ71F23 418 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 PSMG2Q969U7 264 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 C1orf74Q96LT6 269 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 SERPINB11Q96P15 392 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 TRMT61BQ9BVS5 477 aaKnown RBP18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 KLC2Q9H0B6 622 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 OR12D3Q9UGF7 316 aa18.27■□□□□ 0.52
EIF4A1-216ENST00000580888 MYO16Q9Y6X6 1858 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 FAM170BA6NMN3 283 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 LRIG2O94898 1065 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 FGF19O95750 216 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 SP9P0CG40 484 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 TPSB2P20231 275 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 RPS9P46781 194 aaKnown RBP18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 TUFMP49411 452 aaKnown RBP18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 ARL4CP56559 192 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 ZNF33AQ06730 810 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 STAT4Q14765 748 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 TEAD2Q15562 447 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 TPSAB1Q15661 275 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 HIF1AQ16665 826 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 ZNF528Q3MIS6 628 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 TPRG1Q6ZUI0 275 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 B4GALNT4Q76KP1 1039 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 ITIH5Q86UX2 942 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 MFSD6LQ8IWD5 586 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 MAML2Q8IZL2 1156 aaPredicted RBP18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 ZNF687Q8N1G0 1237 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 SH2D3CQ8N5H7 860 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 ZSCAN18Q8TBC5 510 aaPredicted RBP18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 HTR3CQ8WXA8 447 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 IRF7Q92985 503 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 SERPINB12Q96P63 405 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 BRD9Q9H8M2 597 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 SAYSD1Q9NPB0 183 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.26■□□□□ 0.518e-7■■□□□ 13.6
EIF4A1-216ENST00000580888 EURLQ9NYK6 297 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 GMIPQ9P107 970 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 TLR6Q9Y2C9 796 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 SLC27A5Q9Y2P5 690 aa18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 MTF2Q9Y483 593 aaPredicted RBP18.26■□□□□ 0.51
EIF4A1-216ENST00000580888 A0A0A0MRY4 1105 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 WASH4PA8MWX3 477 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 PPP1R12AO14974 1030 aaPredicted RBP18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 SHOX2O60902 331 aaPredicted RBP18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 GJA1P17302 382 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 WEE1P30291 646 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 ACTN2P35609 894 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 MLLT6P55198 1093 aaPredicted RBP18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 GAD2Q05329 585 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 GALNT2Q10471 571 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 FZD5Q13467 585 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 SEMA5AQ13591 1074 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 AUHQ13825 339 aaKnown RBP18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 GRM2Q14416 872 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 UBXN2BQ14CS0 331 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 RASA2Q15283 850 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 FNBP1LQ5T0N5 605 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 SNX30Q5VWJ9 437 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 PPP1R21Q6ZMI0 780 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 ZNF852Q6ZMS4 543 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 DNAJB7Q7Z6W7 309 aaPredicted RBP18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 FCRL2Q96LA5 508 aaPredicted RBP18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 C9orf72Q96LT7 481 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 SPATA13Q96N96 652 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 ZNF334Q9HCZ1 680 aaPredicted RBP18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 HEBP1Q9NRV9 189 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 OLA1Q9NTK5 396 aaKnown RBP18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 DNAJC17Q9NVM6 304 aaKnown RBP18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 SFMBT1Q9UHJ3 866 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 LGALS13Q9UHV8 139 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 XPO7Q9UIA9 1087 aaKnown RBP18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 FBXO4Q9UKT5 387 aa18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 MRPS17Q9Y2R5 130 aaKnown RBP18.25■□□□□ 0.51
EIF4A1-216ENST00000580888 FRYLO94915 3013 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms