RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SYTL3Q4VX76 610 aa3.75□□□□□ -1.81
ATXN3-248ENST00000558190 CPNE1Q99829 537 aa3.75□□□□□ -1.81
ATXN3-248ENST00000558190 CHMP1AQ9HD42 196 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-248ENST00000558190 RASSF1Q9NS23 344 aa3.75□□□□□ -1.81
ATXN3-248ENST00000558190 HDAC3O15379 428 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 BMP10O95393 424 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ITGALP20701 1170 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 MGAT1P26572 445 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ERAP2Q6P179 960 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PLET1Q6UQ28 207 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SETD9Q8NE22 299 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 FBXO30Q8TB52 745 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TBC1D13Q9NVG8 400 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 AP4E1Q9UPM8 1137 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 NCOR1O75376 2440 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 A0A087X0B3 334 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 XPNPEP2O43895 674 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 AIREO43918 545 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CLPXO76031 633 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PGRP06401 933 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 DPP10Q8N608 796 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TRPV3Q8NET8 790 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 IRGQQ8WZA9 623 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 DCP1AQ9NPI6 582 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TRUB2O95900 331 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 MLNP12872 115 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 MCAMP43121 646 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PDK4Q16654 411 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PITRM1Q5JRX3 1037 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TMEM53Q6P2H8 277 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PPP1R16BQ96T49 567 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 COMMD9Q9P000 198 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TRIM38O00635 465 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PIK3CGP48736 1102 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 GPX6P59796 221 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SNAPC1Q16533 368 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ZNF470Q6ECI4 717 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ZNF613Q6PF04 617 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 IKBIPQ70UQ0 350 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SEMA4DQ92854 862 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 GMCL1Q96IK5 515 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 MINPP1Q9UNW1 487 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 GIT1Q9Y2X7 761 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CYP3A7-CYP3A51PA0A087WV96 503 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PSIP1O75475 530 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SNAPC5O75971 98 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CYP3A7P24462 503 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ANKS6Q68DC2 871 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ARHGEF26Q96DR7 871 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 BTBD9Q96Q07 612 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 AGPAT3Q9NRZ7 376 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SALL4Q9UJQ4 1053 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ANKRD6Q9Y2G4 727 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PCDHA10Q9Y5I2 948 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PRPF4O43172 522 aaKnown RBP eCLIP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 RXRGP48443 463 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ACADVLP49748 655 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PEX6Q13608 980 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PLEKHO2Q8TD55 490 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 UNC13AQ9UPW8 1703 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 C15orf38-AP3S2A0A0A6YYH1 394 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 NCF1BA6NI72 391 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 NCF1CA8MVU1 366 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TCEA3O75764 348 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PRKCBP05771 671 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 NCF1P14598 390 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CYP3A5P20815 502 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PTSQ03393 145 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 OLFML2AQ68BL7 652 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 MYLPFQ96A32 169 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 RCN3Q96D15 328 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 INTS10Q9NVR2 710 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 E9PAM4 449 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 RPL35P42766 123 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ZNF699Q32M78 642 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 IL23RQ5VWK5 629 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 LAPTM4BQ86VI4 370 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 GRPEL2Q8TAA5 225 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TRIT1Q9H3H1 467 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PNPLA8Q9NP80 782 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PHF24Q9UPV7 400 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 YARS2Q9Y2Z4 477 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 HSPB11Q9Y547 144 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TLL2Q9Y6L7 1015 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 KIAA0232Q92628 1395 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CYP3A4P08684 503 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 MAP2K4P45985 399 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TMEM62Q0P6H9 643 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 COX10Q12887 443 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CYP2W1Q8TAV3 490 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 NSUN6Q8TEA1 469 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 FAM105AQ9NUU6 356 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SERPINF2P08697 491 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CDK4P11802 303 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CHI3L1P36222 383 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 EFNA5P52803 228 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SNRPFP62306 86 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 NADK2Q4G0N4 442 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 COLGALT1Q8NBJ5 622 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms