RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 PRIM2P49643 509 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 RIPOR3Q96MK2 946 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 TEPSINQ96N21 525 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 LGMNQ99538 433 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 NLNQ9BYT8 704 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 RAD18Q9NS91 495 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTPN21-208ENST00000556564 ZMYM5Q9UJ78 669 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 C5P01031 1676 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 OPLAHO14841 1288 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 SH3BGRLO75368 114 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 ERCC2P18074 760 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 MAPK1P28482 360 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 ATP6V1E1P36543 226 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 RAD23BP54727 409 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 FAM46CQ5VWP2 391 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 XYLT1Q86Y38 959 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 MTFMTQ96DP5 389 aaKnown RBP17.63■□□□□ 0.41
PTPN21-208ENST00000556564 CPXM1Q96SM3 734 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 TEKT2Q9UIF3 430 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 Q9Y3F1 56 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 C8AP07357 584 aa17.63■□□□□ 0.41
PTPN21-208ENST00000556564 TBC1D3DA0A087WVF3 549 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 TBC1D3IA0A087WXS9 549 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 TBC1D3EA0A087X179 549 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 TBC1D3KA0A087X1G2 549 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 TBC1D3FA6NER0 549 aaPredicted RBP17.62■□□□□ 0.41
PTPN21-208ENST00000556564 LRRC10BA6NIK2 292 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 TBC1D3LB9A6J9 549 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 TBC1D3HP0C7X1 549 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 TAS2R40P59535 323 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 MPPE1Q53F39 396 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 TBC1D3GQ6DHY5 549 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 TBC1D3CQ6IPX1 549 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 TBC1D3Q8IZP1 549 aaPredicted RBP17.62■□□□□ 0.41
PTPN21-208ENST00000556564 ARL14EPQ8N8R7 260 aaPredicted RBP17.62■□□□□ 0.41
PTPN21-208ENST00000556564 KREMEN2Q8NCW0 462 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 CCT8L2Q96SF2 557 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 ACBD6Q9BR61 282 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 SPEF2Q9C093 1822 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 IGF2BP3O00425 579 aaKnown RBP eCLIP17.62■□□□□ 0.41
PTPN21-208ENST00000556564 NRP1O14786 923 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 AKAP10O43572 662 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 PSMD8P48556 350 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 SLC10A6Q3KNW5 377 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 CHST9Q7L1S5 443 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 TRIML2Q8N7C3 387 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 ICA1LQ8NDH6 482 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 MCOLN3Q8TDD5 553 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 THUMPD3Q9BV44 507 aaKnown RBP17.62■□□□□ 0.41
PTPN21-208ENST00000556564 SEMA4AQ9H3S1 761 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 NCANO14594 1321 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 SLC38A8A6NNN8 435 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 BGNP21810 368 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 CENPAP49450 140 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 LCLAT1Q6UWP7 414 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 NR1H4Q96RI1 486 aaPredicted RBP17.62■□□□□ 0.41
PTPN21-208ENST00000556564 PTPRHQ9HD43 1115 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 L1RE1Q9UN81 338 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.62■□□□□ 0.41
PTPN21-208ENST00000556564 DNAJC16Q9Y2G8 782 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 NID2Q14112 1375 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 SNAI1O95863 264 aaPredicted RBP17.62■□□□□ 0.41
PTPN21-208ENST00000556564 MT-CO1P00395 513 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 PTPN20Q4JDL3 420 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 N4BP2L1Q5TBK1 243 aaPredicted RBP17.62■□□□□ 0.41
PTPN21-208ENST00000556564 TMEM192Q8IY95 271 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 FBXO39Q8N4B4 442 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 CMTM5Q96DZ9 223 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 ALS2Q96Q42 1657 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 AMD1P17707 334 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 GP5P40197 560 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 MARCKSL1P49006 195 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 BRMS1LQ5PSV4 323 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 SIAH1Q8IUQ4 282 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 NRBF2Q96F24 287 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 PRDM12Q9H4Q4 367 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 PRDM16Q9HAZ2 1276 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 SOHLH2Q9NX45 425 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 MAP10Q9P2G4 905 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 PADI4Q9UM07 663 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 PHTF1Q9UMS5 762 aa17.62■□□□□ 0.41
PTPN21-208ENST00000556564 ECSITQ9BQ95 431 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 THTPAQ9BU02 230 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 LHX5Q9H2C1 402 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 CLDND1Q9NY35 253 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 INPP4BO15327 924 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 RIPK2O43353 540 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 ZBTB14O43829 449 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 TMC5Q6UXY8 1006 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 HORMAD1Q86X24 394 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 SLC22A9Q8IVM8 553 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 DEC1Q9P2X7 70 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 STXBP5LQ9Y2K9 1186 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 NFATC1O95644 943 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 TERF2Q15554 542 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 C10orf53Q8N6V4 93 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 BTN2A3PQ96KV6 586 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 PCDHB18PQ96TA0 734 aa17.61■□□□□ 0.41
PTPN21-208ENST00000556564 ZNF670Q9BS34 389 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms