RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 SMAD6O43541 496 aaKnown RBP21.15■□□□□ 0.98
HIF1A-206ENST00000553999 SYPP08247 313 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 SRCP12931 536 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 ADRA1BP35368 520 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 PTPN9P43378 593 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 GALCP54803 685 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 KRT83P78385 493 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 ARL13BQ3SXY8 428 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 ARTNQ5T4W7 220 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 C6orf118Q5T5N4 469 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 SFMBT2Q5VUG0 894 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 KIAA0895LQ68EN5 471 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 ACAD10Q6JQN1 1059 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 SH2D3CQ8N5H7 860 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 GRIN3AQ8TCU5 1115 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 C1orf74Q96LT6 269 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 C2orf49Q9BVC5 232 aaPredicted RBP21.15■□□□□ 0.98
HIF1A-206ENST00000553999 HAUS4Q9H6D7 363 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 SGK2Q9HBY8 427 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 ATP13A1Q9HD20 1204 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 NDFIP2Q9NV92 336 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 OR12D3Q9UGF7 316 aa21.15■□□□□ 0.98
HIF1A-206ENST00000553999 PI4KAP42356 2102 aa21.14■□□□□ 0.98
HIF1A-206ENST00000553999 IGLV3-10A0A075B6K4 115 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 SPAARA0A1B0GVQ0 90 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 ANKRD62A6NC57 917 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 KCNK3O14649 394 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 RTN2O75298 545 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 CCDC172P0C7W6 258 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 ACVRL1P37023 503 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 DNA2P51530 1060 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 TPM4P67936 248 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 FANCCQ00597 558 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 BNC1Q01954 994 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 C1QBPQ07021 282 aaKnown RBP21.14■□□□□ 0.97
HIF1A-206ENST00000553999 ARID5BQ14865 1188 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 DCUN1D2Q6PH85 259 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 USP30Q70CQ3 517 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 ARCQ7LC44 396 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 MCOLN2Q8IZK6 566 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 SLC6A18Q96N87 628 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 CAMK1GQ96NX5 476 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 PPP1R9BQ96SB3 815 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 TM9SF3Q9HD45 589 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 GPATCH2LQ9NWQ4 482 aa21.14■□□□□ 0.97
HIF1A-206ENST00000553999 SIGLEC16A6NMB1 481 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 ATP9BO43861 1147 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 ADH1BP00325 375 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 IGHV4-34P06331 123 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 PPP2CBP62714 309 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 PPP2CAP67775 309 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 OGDHQ02218 1023 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 ZSCAN23Q3MJ62 389 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 STRADAQ7RTN6 431 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 ZNF571Q7Z3V5 609 aaPredicted RBP21.13■□□□□ 0.97
HIF1A-206ENST00000553999 ADAT2Q7Z6V5 191 aaKnown RBP21.13■□□□□ 0.97
HIF1A-206ENST00000553999 SETD3Q86TU7 594 aaPredicted RBP21.13■□□□□ 0.97
HIF1A-206ENST00000553999 ZNF354CQ86Y25 554 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 DCAF4L2Q8NA75 395 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 CHST14Q8NCH0 376 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 CPLX3Q8WVH0 158 aa21.13■□□□□ 0.97
HIF1A-206ENST00000553999 FCF1Q9Y324 198 aaKnown RBP21.13■□□□□ 0.97
HIF1A-206ENST00000553999 LAMA1P25391 3075 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 TCRBV5S1A1TA0A578 114 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 GOLGA6L19H0YKK7 550 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 RNF103O00237 685 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 CREB3O43889 395 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 LRIG2O94898 1065 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 PLEKP08567 350 aaPredicted RBP21.12■□□□□ 0.97
HIF1A-206ENST00000553999 SPINK2P20155 84 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 C5AR1P21730 350 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 MAT2AP31153 395 aaKnown RBP21.12■□□□□ 0.97
HIF1A-206ENST00000553999 DRD3P35462 400 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 ADPRHP54922 357 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 GSCP56915 257 aaPredicted RBP21.12■□□□□ 0.97
HIF1A-206ENST00000553999 IL9RQ01113 521 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 GNA12Q03113 381 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 KLHL30Q0D2K2 578 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 CNTN1Q12860 1018 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 FOXC1Q12948 553 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 C22orf39Q6P5X5 142 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 NETO2Q8NC67 525 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 PIP4K2CQ8TBX8 421 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 TBC1D31Q96DN5 1066 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 SYT11Q9BT88 431 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 GAREM1Q9H706 876 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 MYO1AQ9UBC5 1043 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 ZNF212Q9UDV6 495 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 SCML1Q9UN30 329 aa21.12■□□□□ 0.97
HIF1A-206ENST00000553999 FNDC3AQ9Y2H6 1198 aaKnown RBP21.12■□□□□ 0.97
HIF1A-206ENST00000553999 TBC1D3DA0A087WVF3 549 aa21.11■□□□□ 0.97
HIF1A-206ENST00000553999 TBC1D3IA0A087WXS9 549 aa21.11■□□□□ 0.97
HIF1A-206ENST00000553999 TBC1D3EA0A087X179 549 aa21.11■□□□□ 0.97
HIF1A-206ENST00000553999 TBC1D3KA0A087X1G2 549 aa21.11■□□□□ 0.97
HIF1A-206ENST00000553999 A0A1W2PQC6 194 aa21.11■□□□□ 0.97
HIF1A-206ENST00000553999 TBC1D3FA6NER0 549 aaPredicted RBP21.11■□□□□ 0.97
HIF1A-206ENST00000553999 LRRC72A6NJI9 287 aa21.11■□□□□ 0.97
HIF1A-206ENST00000553999 TBC1D3LB9A6J9 549 aa21.11■□□□□ 0.97
HIF1A-206ENST00000553999 KPNA3O00505 521 aaPredicted RBP21.11■□□□□ 0.97
HIF1A-206ENST00000553999 TOP3BO95985 862 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms