RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 GALNT4Q8N4A0 578 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 ZSCAN18Q8TBC5 510 aaPredicted RBP13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 ZNF398Q8TD17 642 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 C7orf26Q96N11 449 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 FRMD8Q9BZ67 464 aaPredicted RBP13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 MOCS1Q9NZB8 636 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 FETUBQ9UGM5 382 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 DCDC2Q9UHG0 476 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 ZNF180Q9UJW8 692 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 MAP3K13O43283 966 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 ATP6V1C1P21283 382 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 CD52P31358 61 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 TBL3Q12788 808 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 TEX44Q53QW1 395 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 RASIP1Q5U651 963 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 ARHGAP17Q68EM7 881 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 ESRP1Q6NXG1 681 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 TAC4Q86UU9 113 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 SNX32Q86XE0 403 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 CRYBG2Q8N1P7 616 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 ATPAF2Q8N5M1 289 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 SREK1Q8WXA9 508 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 ZCWPW1Q9H0M4 648 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 IL1RL2Q9HB29 575 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 PRM3Q9NNZ6 103 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 NDFIP2Q9NV92 336 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 MORF4L1Q9UBU8 362 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 TNPO2O14787 897 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 ANPEPP15144 967 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 FSCN1Q16658 493 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 TIGD5Q53EQ6 642 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 BTBD8Q5XKL5 378 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 ZNF470Q6ECI4 717 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 LINC01465Q8N7H1 131 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 LNPEPQ9UIQ6 1025 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 LCTP09848 1927 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 SHROOM3Q8TF72 1996 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 TRPA1O75762 1119 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 LMNAP02545 664 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 HDCP19113 662 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 PNPLA4P41247 253 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 PRPSAP1Q14558 356 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 ZBTB6Q15916 424 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 IQSEC1Q6DN90 963 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 PIP4K2CQ8TBX8 421 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 LENG8Q96PV6 779 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 RBM22Q9NW64 420 aaKnown RBP eCLIP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 ADA2Q9NZK5 511 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 PSME4Q14997 1843 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 AURKAO14965 403 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 TGDSO95455 350 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 ITGB1P05556 798 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 FYNP06241 537 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 PGFP49763 221 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 KYAT3Q6YP21 454 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 NT5DC4Q86YG4 428 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 BHMTQ93088 406 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 NPY6RQ99463 290 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 PARK7Q99497 189 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 GATA5Q9BWX5 397 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 FAM105AQ9NUU6 356 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 ANGPTL2Q9UKU9 493 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 SSX2IPQ9Y2D8 614 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 PRKCGP05129 697 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 SERPINA6P08185 405 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 ETS2P15036 469 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 GRIA4P48058 902 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 DAOAP59103 153 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 MRPS22P82650 360 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 OTUD1Q5VV17 481 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 MAVSQ7Z434 540 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 CIR1Q86X95 450 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 ZNF333Q96JL9 665 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 HNRNPABQ99729 332 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 ACE2Q9BYF1 805 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 SUDS3Q9H7L9 328 aaPredicted RBP13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 TCF7L2Q9NQB0 619 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 XPR1Q9UBH6 696 aa13.92□□□□□ -0.18
PRPF40B-209ENST00000548825 DAB1O75553 588 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 TBX18O95935 607 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 CD68P34810 354 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 DDR2Q16832 855 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 UBXN11Q5T124 520 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 C2orf69Q8N8R5 385 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 GBP5Q96PP8 586 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 MLPHQ9BV36 600 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 VCXQ9H320 206 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 PNPLA8Q9NP80 782 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 CRYL1Q9Y2S2 319 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 ARL5CA6NH57 179 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 ZBTB14O43829 449 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 JUNP05412 331 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 RAG1P15918 1043 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 SERPINB8P50452 374 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 ZNF157P51786 506 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 BLMHQ13867 455 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 MMEL1Q495T6 779 aa13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 ARL13AQ5H913 290 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-209ENST00000548825 HABP4Q5JVS0 413 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms