RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 PCP4P48539 62 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 CDK7P50613 346 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 CYP2J2P51589 502 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 ZXDBP98169 803 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 DCTN1Q14203 1278 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 TIGD6Q17RP2 521 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 TBRG1Q3YBR2 411 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 GXYLT1Q4G148 440 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 FAM171A1Q5VUB5 890 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 AAGABQ6PD74 315 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 SYT13Q7L8C5 426 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 SCN4BQ8IWT1 228 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 RBMXL3Q8N7X1 1067 aaKnown RBP3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 PRR26Q8N8Z3 221 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 CSGALNACT1Q8TDX6 532 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 TRAPPC9Q96Q05 1148 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 PIGSQ96S52 555 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 MPHOSPH6Q99547 160 aaKnown RBP3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 TMEM204Q9BSN7 226 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 SF3B5Q9BWJ5 86 aaKnown RBP3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 TRIM31Q9BZY9 425 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 MYO6Q9UM54 1294 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 PROCRQ9UNN8 238 aa3.72□□□□□ -1.81
HMGB1P29-201ENST00000505659 EVPLQ92817 2033 aa3.71□□□□□ -1.81
HMGB1P29-201ENST00000505659 CCDC194A0A1B0GVG4 234 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 GAGE12JA6NER3 117 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 C4orf47A7E2U8 309 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 C17orf100A8MU93 164 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 SYN3O14994 580 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 KRT38O76015 456 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 ACAA1P09110 424 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 VEGFAP15692 232 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 PPP3CCP48454 512 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 GPS2Q13227 327 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 HDAC1Q13547 482 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 ALKBH1Q13686 389 aaKnown RBP3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 BLMHQ13867 455 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 GPR162Q16538 588 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 CCDC38Q502W7 563 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 INO80DQ53TQ3 878 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 JMJD6Q6NYC1 403 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 CCDC174Q6PII3 467 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 Q6ZSV7 163 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 TRIM74Q86UV6 250 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 TRIM73Q86UV7 250 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 CADM3Q8N126 398 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 DPP10Q8N608 796 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 HORMAD2Q8N7B1 307 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 GABPB2Q8TAK5 448 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 OTUD7AQ8TE49 926 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 APOLD1Q96LR9 279 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 RMI1Q9H9A7 625 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 RNF146Q9NTX7 359 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 ZDHHC7Q9NXF8 308 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 NDUFAF4Q9P032 175 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 UPB1Q9UBR1 384 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 KLQ9UEF7 1012 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 RAP2CQ9Y3L5 183 aa3.71□□□□□ -1.82
HMGB1P29-201ENST00000505659 CNTNAP2Q9UHC6 1331 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 STMND1H3BQB6 276 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 IPO5O00410 1097 aaKnown RBP3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 CSF1P09603 554 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 FCGR2AP12318 317 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 ARSBP15848 533 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 CHN1P15882 459 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 GSTM2P28161 218 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 MLH1P40692 756 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 RASSF2P50749 326 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 ABATP80404 500 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 CHAF1AQ13111 956 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 BRD3Q15059 726 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 DUSP6Q16828 381 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 SLC4A8Q2Y0W8 1093 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 PLK5Q496M5 336 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 C5orf22Q49AR2 442 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 SYTL3Q4VX76 610 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 DCAF12L2Q5VW00 463 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 TANGO2Q6ICL3 276 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 NOL8Q76FK4 1167 aaKnown RBP3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 IGFN1Q86VF2 1251 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 ADAMTS14Q8WXS8 1223 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 CTAGE1Q96RT6 745 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 DDX23Q9BUQ8 820 aaKnown RBP3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 DCLK3Q9C098 648 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 TAF1DQ9H5J8 278 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 PLEKHA2Q9HB19 425 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 TLR8Q9NR97 1041 aaKnown RBP3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 SRP68Q9UHB9 627 aaKnown RBP3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 CDH22Q9UJ99 828 aa3.7□□□□□ -1.82
HMGB1P29-201ENST00000505659 E7EVH7 732 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 SPRY3O43610 288 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 TMCC1O94876 653 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 DDAH2O95865 285 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 CBSLP0DN79 551 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 UNGP13051 313 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 ARSAP15289 507 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 CBSP35520 551 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 THPOP40225 353 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 PCYT1AP49585 367 aa3.69□□□□□ -1.82
HMGB1P29-201ENST00000505659 ENTPD1P49961 510 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms