RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 FBXO4Q9UKT5 387 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 CLEC4EQ9ULY5 219 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 TFR2Q9UP52 801 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 RAD54BQ9Y620 910 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 STON1Q9Y6Q2 735 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 A0A0C4DFX4 3053 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 GRID2IPA4D2P6 1211 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 SHISA7A6NL88 538 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 RASA4BC9J798 803 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 C1QTNF3-AMACRE9PGA6 284 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 DFFAO00273 331 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 PPP1R12AO14974 1030 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 RASA4O43374 803 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 GALR2O43603 387 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 KDELR3O43731 214 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 TJP3O95049 919 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 PAPSS2O95340 614 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 DNTTP04053 509 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 TCF4P15884 667 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 AMPD1P23109 780 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 CTNNA1P35221 906 aaKnown RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 WASP42768 502 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 NR2C2P49116 596 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 VASPP50552 380 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 IRAK1P51617 712 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 SNRPD1P62314 119 aaKnown RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 CSTF1Q05048 431 aaKnown RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 DPYSQ14117 519 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 DPYSL3Q14195 570 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 ZNF235Q14590 738 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 ANGPT1Q15389 498 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 RPS6KA1Q15418 735 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 HNRNPA1L2Q32P51 320 aaKnown RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 USP39Q53GS9 565 aaKnown RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 EMC10Q5UCC4 262 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 NAIF1Q69YI7 327 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 Q6ZS52 159 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 CYP4V2Q6ZWL3 525 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 C11orf74Q86VG3 221 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 APCDD1Q8J025 514 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 RYBPQ8N488 228 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 PCDH20Q8N6Y1 951 aaKnown RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 PAF1Q8N7H5 531 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 OR7D4Q8NG98 312 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 FAM71BQ8TC56 605 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 ATRIPQ8WXE1 791 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 OR8D1Q8WZ84 308 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 PRCCQ92733 491 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 ARHGEF2Q92974 986 aaKnown RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 RNF25Q96BH1 459 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 HAUS1Q96CS2 278 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 MYEOVQ96EZ4 313 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 SPACA7Q96KW9 195 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 RPL10LQ96L21 214 aaKnown RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 RNF157Q96PX1 679 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 CEP44Q9C0F1 390 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 GOLPH3Q9H4A6 298 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 C11orf16Q9NQ32 467 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 DYRK4Q9NR20 520 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 CACNA2D2Q9NY47 1150 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 DLGAP2Q9P1A6 1054 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 UBA2Q9UBT2 640 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-206ENST00000462613 VPS51Q9UID3 782 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 SCML1Q9UN30 329 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 HS3ST2Q9Y278 367 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 HYOU1Q9Y4L1 999 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 PCDHA3Q9Y5H8 950 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 DUSP10Q9Y6W6 482 aa6.52□□□□□ -1.37
SF3B1-206ENST00000462613 TRPM6Q9BX84 2022 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 A0A0D9SEW6 157 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 CCDC163A0A0D9SF12 145 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 TCRBV21S2A2A0A5A6 115 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 SGK1O00141 431 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 DCLK1O15075 740 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 AXIN1O15169 862 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ALOX15BO15296 676 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ATP9BO43861 1147 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 BNIP3LO60238 219 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 SNAP91O60641 907 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ZNF217O75362 1048 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 FTCDO95954 541 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 IGSF6O95976 241 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 PRNPP04156 253 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 TGM2P21980 687 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 NFKBIAP25963 317 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 HOXA6P31267 233 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 CNR2P34972 360 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ACVRL1P37023 503 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 HSPA9P38646 679 aaKnown RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 IL12RB1P42701 662 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 SERPINH1P50454 418 aaKnown RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 DNA2P51530 1060 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 RENBPP51606 427 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 PTPN5P54829 565 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 SATB1Q01826 763 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 IL10RBQ08334 325 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 MMRN1Q13201 1228 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 FZD5Q13467 585 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 SERINC3Q13530 473 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 CAMK2GQ13555 558 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms