RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ABI3BPQ7Z7G0 1075 aa17.69■□□□□ 0.42
UBE2D4-209ENST00000454428 TAC4Q86UU9 113 aa17.69■□□□□ 0.42
UBE2D4-209ENST00000454428 CCDC117Q8IWD4 279 aaPredicted RBP17.69■□□□□ 0.42
UBE2D4-209ENST00000454428 OR52K2Q8NGK3 314 aa17.69■□□□□ 0.42
UBE2D4-209ENST00000454428 OR8D1Q8WZ84 308 aa17.69■□□□□ 0.42
UBE2D4-209ENST00000454428 ALG14Q96F25 216 aa17.69■□□□□ 0.42
UBE2D4-209ENST00000454428 SERPINB11Q96P15 392 aa17.69■□□□□ 0.42
UBE2D4-209ENST00000454428 CALN1Q9BXU9 219 aa17.69■□□□□ 0.42
UBE2D4-209ENST00000454428 ABCG4Q9H172 646 aa17.69■□□□□ 0.42
UBE2D4-209ENST00000454428 USP29Q9HBJ7 922 aa17.69■□□□□ 0.42
UBE2D4-209ENST00000454428 GPR27Q9NS67 375 aa17.69■□□□□ 0.42
UBE2D4-209ENST00000454428 COQ4Q9Y3A0 265 aa17.69■□□□□ 0.42
UBE2D4-209ENST00000454428 MCF2LO15068 1137 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 RHOBTB3O94955 611 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 CALCAP01258 141 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 CENPBP07199 599 aaPredicted RBP17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 CTSLP07711 333 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 PRR29P0C7W0 189 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 RBMS1P29558 406 aaKnown RBP17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 ME1P48163 572 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 SLC12A1Q13621 1099 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 FOXD4L6Q3SYB3 417 aaPredicted RBP17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 SYPL2Q5VXT5 272 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 GUSBP11Q6P575 273 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 FOXD4L3Q6VB84 417 aaPredicted RBP17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 Q6ZVU0 165 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 DSG4Q86SJ6 1040 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 CLEC14AQ86T13 490 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 CCAR2Q8N163 923 aaKnown RBP17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 IFT43Q96FT9 208 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 PRMT1Q99873 361 aaKnown RBP17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 ZFR2Q9UPR6 939 aaKnown RBP17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 AHCTF1Q8WYP5 2266 aa17.68■□□□□ 0.42
UBE2D4-209ENST00000454428 RNF225M0QZC1 329 aaPredicted RBP17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 ALPPL2P10696 532 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 NNMTP40261 264 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 DUSP3P51452 185 aaPredicted RBP17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 PDX1P52945 283 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 NFKB2Q00653 900 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 SULT2A1Q06520 285 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 CDKN3Q16667 212 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 ZC3H12AQ5D1E8 599 aaKnown RBP17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 FOXD4L5Q5VV16 416 aaPredicted RBP17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 HORMAD1Q86X24 394 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 CHSY1Q86X52 802 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 ZNF548Q8NEK5 533 aaPredicted RBP17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 FOXD4L4Q8WXT5 416 aaPredicted RBP17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 ARRDC3Q96B67 414 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 MIS12Q9H081 205 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 UPF2Q9HAU5 1272 aaKnown RBP17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 STARD5Q9NSY2 213 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 KLF15Q9UIH9 416 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 KIAA1257Q9ULG3 409 aa17.67■□□□□ 0.42
UBE2D4-209ENST00000454428 ALOX15BO15296 676 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 IGLV3-25P01717 112 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 ITGB6P18564 788 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 HNRNPA2B1P22626 353 aaKnown RBP17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 RPL13P26373 211 aaKnown RBP17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 C1QBPQ07021 282 aaKnown RBP17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 EIF4EBP2Q13542 120 aaPredicted RBP17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 FZD2Q14332 565 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 DRAP1Q14919 205 aaPredicted RBP17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 DLG2Q15700 870 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 CNGA2Q16280 664 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 ZSCAN23Q3MJ62 389 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 OR6B2Q6IFH4 312 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 CRTC1Q6UUV9 634 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 GUF1Q8N442 669 aaKnown RBP17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 ERCC4Q92889 916 aaPredicted RBP17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 GRAMD1AQ96CP6 724 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 CCDC97Q96F63 343 aaPredicted RBP17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 BMFQ96LC9 184 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 HSFY1Q96LI6 401 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 DUSP23Q9BVJ7 150 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 FAM117AQ9C073 453 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 DNAJC28Q9NX36 388 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 OR51B4Q9Y5P0 310 aa17.66■□□□□ 0.42
UBE2D4-209ENST00000454428 TRPM6Q9BX84 2022 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 NEMP2A6NFY4 417 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 C1QTNF3-AMACRE9PGA6 284 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 M0QYV0 167 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 FBXO21O94952 628 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 MYL1P05976 194 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 BRD2P25440 801 aaKnown RBP17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 AKT2P31751 481 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 RPL34P49207 117 aaKnown RBP17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 IRAK1P51617 712 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 PITX1P78337 314 aaPredicted RBP17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 ZNF177Q13360 481 aaPredicted RBP17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 FGL2Q14314 439 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 ACCSLQ4AC99 568 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 PERM1Q5SV97 790 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 SEL1L3Q68CR1 1132 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 ZCCHC8Q6NZY4 707 aaKnown RBP17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 NEK5Q6P3R8 708 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 Q6ZSR6 202 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 EFL1Q7Z2Z2 1120 aaKnown RBP17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 BTN2A3PQ96KV6 586 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 CCNL2Q96S94 520 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms