RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 ATP5BP06576 529 aaKnown RBP9.41□□□□□ -0.9
RFX3-207ENST00000449190 PABPC1P11940 636 aaKnown RBP9.41□□□□□ -0.9
RFX3-207ENST00000449190 HNRNPLP14866 589 aaKnown RBP eCLIP9.41□□□□□ -0.95e-9■■■■□ 21
RFX3-207ENST00000449190 ERCC2P18074 760 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 CTNNA1P35221 906 aaKnown RBP9.41□□□□□ -0.9
RFX3-207ENST00000449190 COPS2P61201 443 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 SEMA3BQ13214 749 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 TFDP2Q14188 446 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 DPYSL3Q14195 570 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 ALFQ53S48 1182 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 ANKRD20A8PQ5CZ79 823 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 MANEALQ5VSG8 457 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 RNF219Q5W0B1 726 aaPredicted RBP9.41□□□□□ -0.9
RFX3-207ENST00000449190 SDE2Q6IQ49 451 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 TMCO3Q6UWJ1 677 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 ZNF783Q6ZMS7 281 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 CYP4V2Q6ZWL3 525 aaPredicted RBP9.41□□□□□ -0.9
RFX3-207ENST00000449190 RFX6Q8HWS3 928 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 SFTPA1Q8IWL2 248 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 AHI1Q8N157 1196 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 ALLCQ8N6M5 410 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 GPR161Q8N6U8 529 aaKnown RBP9.41□□□□□ -0.9
RFX3-207ENST00000449190 ZNF513Q8N8E2 541 aaPredicted RBP9.41□□□□□ -0.9
RFX3-207ENST00000449190 RTL3Q8N8U3 475 aaKnown RBP9.41□□□□□ -0.9
RFX3-207ENST00000449190 TXNDC5Q8NBS9 432 aaKnown RBP9.41□□□□□ -0.9
RFX3-207ENST00000449190 TSTD1Q8NFU3 115 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 GAB3Q8WWW8 586 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 RAPGEF5Q92565 580 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 CSPG4P5Q96PW8 444 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 ZNF670Q9BS34 389 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 SPON2Q9BUD6 331 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 POLMQ9NP87 494 aaPredicted RBP9.41□□□□□ -0.9
RFX3-207ENST00000449190 KLHL11Q9NVR0 708 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 POLR3BQ9NW08 1133 aaPredicted RBP9.41□□□□□ -0.9
RFX3-207ENST00000449190 DNAI1Q9UI46 699 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 GGA2Q9UJY4 613 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 VPS28Q9UK41 221 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 PLA2G4CQ9UP65 541 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 TBC1D30Q9Y2I9 924 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 CAPN6Q9Y6Q1 641 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 HELZP42694 1942 aaKnown RBP9.41□□□□□ -0.9
RFX3-207ENST00000449190 TRIOO75962 3097 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 ARHGAP42A6NI28 874 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 ZNF487B1APH4 448 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 PRRT4C9JH25 899 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 SGK1O00141 431 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 NPC1O15118 1278 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 RPP40O75818 363 aaKnown RBP9.4□□□□□ -0.9
RFX3-207ENST00000449190 ASLP04424 464 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 RETP07949 1114 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 AMPD1P23109 780 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 NTSR1P30989 418 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 HOXC13P31276 330 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 SERPINB6P35237 376 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 NNMTP40261 264 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 PXNP49023 591 aaPredicted RBP9.4□□□□□ -0.9
RFX3-207ENST00000449190 DNA2P51530 1060 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 ARSEP51690 589 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 NDST2P52849 883 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 YBEYP58557 167 aaPredicted RBP9.4□□□□□ -0.9
RFX3-207ENST00000449190 ST8SIA6P61647 398 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 GNG11P61952 73 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 SULT2A1Q06520 285 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 LMAN2Q12907 356 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 POLD3Q15054 466 aaPredicted RBP9.4□□□□□ -0.9
RFX3-207ENST00000449190 EIF4HQ15056 248 aaKnown RBP9.4□□□□□ -0.9
RFX3-207ENST00000449190 FSCBQ5H9T9 825 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 MEI1Q5TIA1 1274 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 CCDC181Q5TID7 509 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 RNF43Q68DV7 783 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 IL31Q6EBC2 164 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 LAIR1Q6GTX8 287 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 SPOCD1Q6ZMY3 1216 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 CEP68Q76N32 757 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 BZW1Q7L1Q6 419 aaKnown RBP9.4□□□□□ -0.9
RFX3-207ENST00000449190 RASSF3Q86WH2 238 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 VSIG1Q86XK7 387 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.4□□□□□ -0.9
RFX3-207ENST00000449190 FAM71BQ8TC56 605 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 TSC1Q92574 1164 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 KRT35Q92764 455 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 P2RY11Q96G91 374 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 LOXL4Q96JB6 756 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 RNF157Q96PX1 679 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 HHIPQ96QV1 700 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 C2orf49Q9BVC5 232 aaPredicted RBP9.4□□□□□ -0.9
RFX3-207ENST00000449190 CIPCQ9C0C6 399 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 MAGEH1Q9H213 219 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 KCND1Q9NSA2 647 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 ELOVL2Q9NXB9 296 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 NCDNQ9UBB6 729 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 GMEB2Q9UKD1 530 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 HCN2Q9UL51 889 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 SMG5Q9UPR3 1016 aaKnown RBP9.4□□□□□ -0.9
RFX3-207ENST00000449190 JRKLQ9Y4A0 524 aa9.4□□□□□ -0.9
RFX3-207ENST00000449190 MYOFQ9NZM1 2061 aa9.4□□□□□ -0.91
RFX3-207ENST00000449190 PTPRZ1P23471 2315 aaPredicted RBP9.39□□□□□ -0.91
RFX3-207ENST00000449190 APOL1O14791 398 aa9.39□□□□□ -0.91
RFX3-207ENST00000449190 ZBTB24O43167 697 aaPredicted RBP9.39□□□□□ -0.91
RFX3-207ENST00000449190 ADAM23O75077 832 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms