RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CLPBQ9H078 707 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 NUAK2Q9H093 628 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 SYNPO2LQ9H987 977 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 SLC22A11Q9NSA0 550 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 SEMA4GQ9NTN9 838 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 MTMR4Q9NYA4 1195 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 ARPP21Q9UBL0 812 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 GDAQ9Y2T3 454 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 DMRT1Q9Y5R6 373 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 ITSN1Q15811 1721 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 ABCA6Q8N139 1617 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 FRMPD1Q5SYB0 1578 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 MED14O60244 1454 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 LMTK3Q96Q04 1460 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 PDS5BQ9NTI5 1447 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 CHD2O14647 1828 aaKnown RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 KANK1Q14678 1352 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 CCDC171Q6TFL3 1326 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 A6NLC8 198 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 C16orf96A6NNT2 1141 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 KIF1CO43896 1103 aaKnown RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 CNTN5O94779 1100 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 REC8O95072 547 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 ENO1P06733 434 aaKnown RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 IFIT1P09914 478 aaKnown RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 RFPL3SP0C7P2 107 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 CYP2D6P10635 497 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 TGM2P21980 687 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 U2AF2P26368 475 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 USP8P40818 1118 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 LIFRP42702 1097 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 MMP14P50281 582 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 TUBP50607 506 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 GTF2A1P52655 376 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 KPNB1Q14974 876 aaKnown RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 BMP2KLQ5H9B9 411 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 LIPMQ5VYY2 423 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 RANBP10Q6VN20 620 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 C16orf71Q8IYS4 520 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 ADGRF3Q8IZF5 1079 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 CCDC112Q8NEF3 446 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 CELF1Q92879 486 aaKnown RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 SECISBP2LQ93073 1101 aaKnown RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 P2RY11Q96G91 374 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 MASTLQ96GX5 879 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 ZNF764Q96H86 408 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 RITA1Q96K30 269 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 ABHD14AQ9BUJ0 271 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 SLC26A6Q9BXS9 759 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 PCED1AQ9H1Q7 454 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 JMJD4Q9H9V9 463 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 ARL8BQ9NVJ2 186 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 RBM28Q9NW13 759 aaKnown RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 ING1Q9UK53 422 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 PNMA2Q9UL42 364 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 DDX19BQ9UMR2 479 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 SUFUQ9UMX1 484 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 KNSTRNQ9Y448 316 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 V9GYY5 206 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 IFT140Q96RY7 1462 aa4.81□□□□□ -1.64
HMGB1P16-201ENST00000447155 COL11A2P13942 1736 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 PREX2Q70Z35 1606 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 EMSYQ7Z589 1322 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 RAD50Q92878 1312 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 NEURL4Q96JN8 1562 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 SYCE3A1L190 88 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 NPIPB13A6NJU9 1138 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 NPIPB5A8MRT5 1133 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 NPIPB4C9JG80 1138 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 TMEM232C9JQI7 657 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 SMIM22K7EJ46 135 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 PEX12O00623 359 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 PROP1O75360 226 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 SGPL1O95470 568 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 HNRNPA1P09651 372 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 ALDOCP09972 364 aaKnown RBP4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 PRPH2P23942 346 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 ELF1P32519 619 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 IDUAP35475 653 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 PSMC2P35998 433 aaKnown RBP4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 SHC2P98077 582 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 B4GALNT1Q00973 533 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 GOLGA8FQ08AF8 430 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 TBL3Q12788 808 aaKnown RBP4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 ALKBH1Q13686 389 aaKnown RBP4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 MVPQ14764 893 aaKnown RBP4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 RUNDC3AQ59EK9 446 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 NAA35Q5VZE5 725 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 CCDC91Q7Z6B0 441 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 HEATR4Q86WZ0 1026 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 CHSY1Q86X52 802 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 RFX6Q8HWS3 928 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 CNPY4Q8N129 248 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 TSPYL6Q8N831 410 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 STAMQ92783 540 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 ATP2A3Q93084 1043 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 ASB2Q96Q27 587 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 NCAPGQ9BPX3 1015 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 GATA5Q9BWX5 397 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms