RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 TUSC3Q13454 348 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 CFAP157Q5JU67 520 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 DCLRE1AQ6PJP8 1040 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 BEND5Q7L4P6 421 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 OR10T2Q8NGX3 314 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 DPF3Q92784 378 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 AGAP3Q96P47 875 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 VAT1Q99536 393 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 TUBB6Q9BUF5 446 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 LRRC40Q9H9A6 602 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 KCNK4Q9NYG8 393 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 FAM237BA0A1B0GVD1 139 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 WFS1O76024 890 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 GSRP00390 522 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 IGLV3-25P01717 112 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 PTPN4P29074 926 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 FCGRTP55899 365 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 PDE1CQ14123 709 aaPredicted RBP16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 FRG1Q14331 258 aaKnown RBP16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 LPIN1Q14693 890 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 IRGCQ6NXR0 463 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 RASSF3Q86WH2 238 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 DQX1Q8TE96 717 aaKnown RBP16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 FCRL3Q96P31 734 aaPredicted RBP16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 TLE6Q9H808 572 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 VANGL2Q9ULK5 521 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 FAM155AB1AL88 458 aaPredicted RBP16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 ERVK-10P10266 1014 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 SKIP12755 728 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 CDK18Q07002 472 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 SREBF2Q12772 1141 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 EIF4EBP2Q13542 120 aaPredicted RBP16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 TMEM135Q86UB9 458 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 LRRTM3Q86VH5 581 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 RSPH1Q8WYR4 309 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 PTCD3Q96EY7 689 aaKnown RBP16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 TUBGCP5Q96RT8 1024 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 TMEM209Q96SK2 561 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 MLPHQ9BV36 600 aaPredicted RBP16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 TRIM62Q9BVG3 475 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 OSBPL2Q9H1P3 480 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 FBXO6Q9NRD1 293 aaPredicted RBP16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 EMCNQ9ULC0 261 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 WASF2Q9Y6W5 498 aa16.58■□□□□ 0.24
PIKFYVE-206ENST00000443896 CCDC195A0A1B0GUA6 201 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 GLRA3O75311 464 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 USP12O75317 370 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 TRIM32Q13049 653 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 KPNB1Q14974 876 aaKnown RBP16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 ITPRIPL1Q6GPH6 555 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 CES3Q6UWW8 571 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 HASPINQ8TF76 798 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 IFT43Q96FT9 208 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 HIC2Q96JB3 615 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 CPNE1Q99829 537 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 ADAM2Q99965 735 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 BFARQ9NZS9 450 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 TDRD15B5MCY1 1934 aaKnown RBP16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 TPD52L2O43399 206 aaKnown RBP16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 OR6B1O95007 311 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 GP5P40197 560 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 FLT3LGP49771 235 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 KCNA10Q16322 511 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 FAM91A1Q658Y4 838 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 KBTBD2Q8IY47 623 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 ZSCAN18Q8TBC5 510 aaPredicted RBP16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 UROC1Q96N76 676 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 CLIC5Q9NZA1 410 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 IL1RAPL1Q9NZN1 696 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 C2orf71A6NGG8 1288 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 CCDC160A6NGH7 325 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 VHLP40337 213 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 ZBTB16Q05516 673 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 KRT72Q14CN4 511 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 MAPRE1Q15691 268 aaKnown RBP16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 HSF5Q4G112 596 aaPredicted RBP16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 PABPC1LQ4VXU2 614 aaKnown RBP16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 OVOS1Q6IE37 1185 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 KLHDC9Q8NEP7 349 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 ATP2A3Q93084 1043 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 PRR11Q96HE9 360 aaPredicted RBP16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 C20orf27Q9GZN8 174 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 ARL8BQ9NVJ2 186 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 DCDC2Q9UHG0 476 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 NEU3Q9UQ49 428 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 ZNF711Q9Y462 761 aa16.57■□□□□ 0.24
PIKFYVE-206ENST00000443896 CA12O43570 354 aa16.56■□□□□ 0.24
PIKFYVE-206ENST00000443896 USP1O94782 785 aa16.56■□□□□ 0.24
PIKFYVE-206ENST00000443896 CYP2C18P33260 490 aa16.56■□□□□ 0.24
PIKFYVE-206ENST00000443896 N4BP2L1Q5TBK1 243 aaPredicted RBP16.56■□□□□ 0.24
PIKFYVE-206ENST00000443896 GRTP1Q5TC63 336 aa16.56■□□□□ 0.24
PIKFYVE-206ENST00000443896 CCSAPQ6IQ19 270 aaPredicted RBP16.56■□□□□ 0.24
PIKFYVE-206ENST00000443896 TEKT5Q96M29 485 aa16.56■□□□□ 0.24
PIKFYVE-206ENST00000443896 ZNF395Q9H8N7 513 aaPredicted RBP16.56■□□□□ 0.24
PIKFYVE-206ENST00000443896 DDX18Q9NVP1 670 aaKnown RBP16.56■□□□□ 0.24
PIKFYVE-206ENST00000443896 ARHGEF38Q9NXL2 777 aa16.56■□□□□ 0.24
PIKFYVE-206ENST00000443896 TXNDC16Q9P2K2 825 aa16.56■□□□□ 0.24
PIKFYVE-206ENST00000443896 INPP5FQ9Y2H2 1132 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms