RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 MUC3BQ9H195 1237 aa21.31■■□□□ 1
CPNE1-219ENST00000440240 PDCL3Q9H2J4 239 aa21.31■■□□□ 1
CPNE1-219ENST00000440240 ARHGAP20Q9P2F6 1191 aa21.31■■□□□ 1
CPNE1-219ENST00000440240 SARDHQ9UL12 918 aa21.31■■□□□ 1
CPNE1-219ENST00000440240 STAP1Q9ULZ2 295 aa21.31■■□□□ 1
CPNE1-219ENST00000440240 FARP1Q9Y4F1 1045 aaPredicted RBP21.31■■□□□ 1
CPNE1-219ENST00000440240 ITPR1Q14643 2758 aa21.31■■□□□ 1
CPNE1-219ENST00000440240 ENC1O14682 589 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 RXRGP48443 463 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 CXCR3P49682 368 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 CCDC15Q0P6D6 951 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 CAMK2BQ13554 666 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 STAT4Q14765 748 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 SHBQ15464 509 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 DHRS13Q6UX07 377 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 C14orf80Q86SX3 495 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 SH2D3CQ8N5H7 860 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 TMEM35BQ8NCS4 154 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 PIP4K2CQ8TBX8 421 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 NPY6RQ99463 290 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 TKTL2Q9H0I9 626 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 NDST4Q9H3R1 872 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 ARHGEF38Q9NXL2 777 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.3■■□□□ 1
CPNE1-219ENST00000440240 HS3ST2Q9Y278 367 aa21.3■■□□□ 1
CPNE1-219ENST00000440240 URB1O60287 2271 aaKnown RBP21.29■■□□□ 1
CPNE1-219ENST00000440240 E9PAM4 449 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 IRAK1P51617 712 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 METAP1P53582 386 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 RNASE9P60153 205 aaKnown RBP21.29■■□□□ 1
CPNE1-219ENST00000440240 PPP2CBP62714 309 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 PPP2CAP67775 309 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 CNTN1Q12860 1018 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 C19orf48Q6RUI8 117 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 LRRC31Q6UY01 552 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 Q6ZVU0 165 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 TRIM69Q86WT6 500 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 NT5C3BQ969T7 300 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 PGAP3Q96FM1 320 aaPredicted RBP21.29■■□□□ 1
CPNE1-219ENST00000440240 CNDP2Q96KP4 475 aaKnown RBP21.29■■□□□ 1
CPNE1-219ENST00000440240 C1orf74Q96LT6 269 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 CCDC114Q96M63 670 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 C2orf49Q9BVC5 232 aaPredicted RBP21.29■■□□□ 1
CPNE1-219ENST00000440240 PIGVQ9NUD9 493 aa21.29■■□□□ 1
CPNE1-219ENST00000440240 NBEAQ8NFP9 2946 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 PLXNA2O75051 1894 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 FAM149AA5PLN7 773 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 PRAMEF26H0Y7S4 382 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 PLK4O00444 970 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 ADCY5O95622 1261 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 EPHA8P29322 1005 aaPredicted RBP21.28■■□□□ 1
CPNE1-219ENST00000440240 MAT2AP31153 395 aaKnown RBP21.28■■□□□ 1
CPNE1-219ENST00000440240 SCNN1AP37088 669 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 GGCXP38435 758 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 GABRB2P47870 512 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 CYP4F3Q08477 520 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 VWA3BQ502W6 1294 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 SETMARQ53H47 684 aaPredicted RBP21.28■■□□□ 1
CPNE1-219ENST00000440240 AGBL4Q5VU57 503 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 NEK5Q6P3R8 708 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 SETD3Q86TU7 594 aaPredicted RBP21.28■■□□□ 1
CPNE1-219ENST00000440240 MARCH9Q86YJ5 346 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 EID2Q8N6I1 236 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 ATP11CQ8NB49 1132 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 C18orf8Q96DM3 657 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 PREBQ9HCU5 417 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 PLCB1Q9NQ66 1216 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 AJAP1Q9UKB5 411 aaPredicted RBP21.28■■□□□ 1
CPNE1-219ENST00000440240 RAXQ9Y2V3 346 aa21.28■■□□□ 1
CPNE1-219ENST00000440240 CELSR3Q9NYQ7 3312 aa21.27■■□□□ 1
CPNE1-219ENST00000440240 DRGXA6NNA5 263 aa21.27■■□□□ 1
CPNE1-219ENST00000440240 BNIP3LO60238 219 aa21.27■■□□□ 1
CPNE1-219ENST00000440240 RNGTTO60942 597 aaKnown RBP21.27■■□□□ 1
CPNE1-219ENST00000440240 CNTN5O94779 1100 aa21.27■■□□□ 1
CPNE1-219ENST00000440240 RHOCP08134 193 aa21.27■■□□□ 1
CPNE1-219ENST00000440240 SRCP12931 536 aa21.27■■□□□ 1
CPNE1-219ENST00000440240 JUPP14923 745 aa21.27■■□□□ 1
CPNE1-219ENST00000440240 CDH5P33151 784 aaPredicted RBP21.27■■□□□ 1
CPNE1-219ENST00000440240 SULT1E1P49888 294 aa21.27■■□□□ 1
CPNE1-219ENST00000440240 DEUP1Q05D60 604 aa21.27■■□□□ 1
CPNE1-219ENST00000440240 SLC25A52Q3SY17 297 aa21.27■■□□□ 1
CPNE1-219ENST00000440240 ERICH1Q86X53 443 aa21.27■■□□□ 1
CPNE1-219ENST00000440240 TUBGCP2Q9BSJ2 902 aa21.27■■□□□ 1
CPNE1-219ENST00000440240 RFPL3O75679 317 aa21.26■□□□□ 0.99
CPNE1-219ENST00000440240 MT-CO1P00395 513 aa21.26■□□□□ 0.99
CPNE1-219ENST00000440240 PNMA6AP0CW24 399 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-219ENST00000440240 CYP11B1P15538 503 aa21.26■□□□□ 0.99
CPNE1-219ENST00000440240 CHRNA3P32297 505 aa21.26■□□□□ 0.99
CPNE1-219ENST00000440240 HNF1BP35680 557 aa21.26■□□□□ 0.99
CPNE1-219ENST00000440240 CLCN6P51797 869 aa21.26■□□□□ 0.99
CPNE1-219ENST00000440240 BNIP3Q12983 259 aa21.26■□□□□ 0.99
CPNE1-219ENST00000440240 RAPGEF1Q13905 1077 aa21.26■□□□□ 0.99
CPNE1-219ENST00000440240 DRAP1Q14919 205 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-219ENST00000440240 POM121L1PQ3SYA9 428 aa21.26■□□□□ 0.99
CPNE1-219ENST00000440240 OTUD1Q5VV17 481 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-219ENST00000440240 SPATS2Q86XZ4 545 aaKnown RBP21.26■□□□□ 0.99
CPNE1-219ENST00000440240 TMIEQ8NEW7 156 aa21.26■□□□□ 0.99
CPNE1-219ENST00000440240 OR2A12Q8NGT7 310 aa21.26■□□□□ 0.99
CPNE1-219ENST00000440240 SCUBE2Q9NQ36 999 aa21.26■□□□□ 0.99
CPNE1-219ENST00000440240 DACH1Q9UI36 760 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms