RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 TIFABQ6ZNK6 161 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 CYS1Q717R9 158 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 PDZD4Q76G19 769 aaPredicted RBP15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 NUDCD3Q8IVD9 361 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 ARID3BQ8IVW6 561 aaPredicted RBP15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 THEM5Q8N1Q8 247 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 ATP2A3Q93084 1043 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 LRMDAQ9H2I8 198 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 CAB39LQ9H9S4 337 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 RGS18Q9NS28 235 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 TXLNGQ9NUQ3 528 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 TBC1D13Q9NVG8 400 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 ARL8BQ9NVJ2 186 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 KLF11O14901 512 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 KCNA4P22459 653 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 SERPINB6P35237 376 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 SKIV2L2P42285 1042 aaKnown RBP15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 HSP90AA5PQ58FG0 334 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 MANEALQ5VSG8 457 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 SPNS2Q8IVW8 549 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 COLGALT2Q8IYK4 626 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 PCSK9Q8NBP7 692 aaKnown RBP15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 B4GALNT2Q8NHY0 566 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 CD99L2Q8TCZ2 262 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 FCRL2Q96LA5 508 aaPredicted RBP15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 SMOC2Q9H3U7 446 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 ARMCX1Q9P291 453 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 PCDHB8Q9UN66 801 aa15.49■□□□□ 0.07
SCAMP4-202ENST00000409472 TET1Q8NFU7 2136 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 NCAM2O15394 837 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 ITM2AO43736 263 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 MX2P20592 715 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 NMBRP28336 390 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 ARRB2P32121 409 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 MAP3K21Q5TCX8 1036 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 GLB1LQ6UWU2 654 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 TMEM135Q86UB9 458 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 CDKL2Q92772 493 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 UROC1Q96N76 676 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 MIPEPQ99797 713 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 SLC39A8Q9C0K1 460 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 RAD54BQ9Y620 910 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 TYMPP19971 482 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 CCNG1P51959 295 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 IRF9Q00978 393 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 SP3Q02447 781 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 ANKRD20A4Q4UJ75 823 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 FASTKD1Q53R41 847 aaKnown RBP15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 SPANXN3Q5MJ09 141 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 ARHGAP22Q7Z5H3 698 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 SCML4Q8N228 414 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 PLD6Q8N2A8 252 aaKnown RBP15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 DCLK2Q8N568 766 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 ZNF398Q8TD17 642 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 NMUR2Q9GZQ4 415 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 OSBPL2Q9H1P3 480 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 LRRC40Q9H9A6 602 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 TMEM216Q9P0N5 145 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 HS3ST4Q9Y661 456 aa15.48■□□□□ 0.07
SCAMP4-202ENST00000409472 PLXNA3P51805 1871 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 INPPL1O15357 1258 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 SNNO75324 88 aaPredicted RBP15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 PBX3P40426 434 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 PDE1BQ01064 536 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 PCLAFQ15004 111 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 NOMO2Q5JPE7 1267 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 MBLAC2Q68D91 279 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 STRA8Q7Z7C7 330 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 SDCCAG8Q86SQ7 713 aaPredicted RBP15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 RNF180Q86T96 592 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 ATPAF2Q8N5M1 289 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 ZNF513Q8N8E2 541 aaPredicted RBP15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 ATAD1Q8NBU5 361 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 DTNBP1Q96EV8 351 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 SNX15Q9NRS6 342 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 ABCC13Q9NSE7 274 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 BFARQ9NZS9 450 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 PLIN3O60664 434 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 MAFKO60675 156 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 TGDSO95455 350 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 TBX18O95935 607 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 RPLP2P05387 115 aaKnown RBP15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 FGF3P11487 239 aaPredicted RBP15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 GP5P40197 560 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 PPP2R5DQ14738 602 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 MAPRE1Q15691 268 aaKnown RBP15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 PIK3R6Q5UE93 754 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 SLC24A5Q71RS6 500 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 FAM81AQ8TBF8 368 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 C7orf26Q96N11 449 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 RBBP8Q99708 897 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 EBF4Q9BQW3 602 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 NAT9Q9BTE0 207 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 TBC1D10AQ9BXI6 508 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 ZCWPW1Q9H0M4 648 aa15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 MTO1Q9Y2Z2 717 aaKnown RBP15.47■□□□□ 0.07
SCAMP4-202ENST00000409472 A0A1W2PQ45 241 aaPredicted RBP15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 A0A1W2PQY0 241 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 IL1BP01584 269 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms