RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 MSH3P20585 1137 aa13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 PTPN9P43378 593 aa13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 PLK1P53350 603 aa13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 ANKRD20A4Q4UJ75 823 aa13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 TMCO4Q5TGY1 634 aa13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 UNC5AQ6ZN44 842 aa13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 CLEC20AQ6ZU45 233 aa13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 SERINC5Q86VE9 423 aa13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 LRRC49Q8IUZ0 686 aa13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 ZNF557Q8N988 423 aaPredicted RBP13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 TAS2R13Q9NYV9 303 aa13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 ANGPTL2Q9UKU9 493 aa13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 PDZK1P1A8MUH7 402 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 SHBGP04278 402 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 KCNA4P22459 653 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 ATXN3P54252 364 aaPredicted RBP13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 PCID2Q5JVF3 399 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 PHACTR4Q8IZ21 702 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 TSEN34Q9BSV6 310 aaKnown RBP13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 SPATA16Q9BXB7 569 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 BPIFA1Q9NP55 256 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 MAP3K13O43283 966 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 TBX18O95935 607 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 FMO4P31512 558 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 WNT3AP56704 352 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 FPGSQ05932 587 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 TRMT11Q7Z4G4 463 aaKnown RBP13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 C11orf96Q7Z7L8 435 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 ZMAT2Q96NC0 199 aaKnown RBP13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 KDM4CQ9H3R0 1056 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 IL1RL2Q9HB29 575 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 FBXL21Q9UKT6 434 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 DNAJC16Q9Y2G8 782 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 B2RBV5 119 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 RGS9BPQ6ZS82 235 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 FUKQ8N0W3 1084 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 KREMEN2Q8NCW0 462 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 SRPK1Q96SB4 655 aaKnown RBP13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 FAM124BQ9H5Z6 455 aaPredicted RBP13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 COG4Q9H9E3 785 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 RIC8BQ9NVN3 520 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 NCKIPSDQ9NZQ3 722 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 AGO1Q9UL18 857 aaKnown RBP13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 STYXL1Q9Y6J8 313 aa13.33□□□□□ -0.28
PTPRN2-202ENST00000389416 C4AP0C0L4 1744 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 IL1BP01584 269 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 KCNE1P15382 129 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 AIF1P55008 147 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 DRG2P55039 364 aaKnown RBP13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 PLIN5Q00G26 463 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 GRTP1Q5TC63 336 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 SYPL2Q5VXT5 272 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 DOK6Q6PKX4 331 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 GET4Q7L5D6 327 aaPredicted RBP13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 CHPFQ8IZ52 775 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 CRYBG2Q8N1P7 616 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 CCDC126Q96EE4 140 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 MCRS1Q96EZ8 462 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 FAXDC2Q96IV6 333 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 MRPL1Q9BYD6 325 aaKnown RBP13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 TRIM15Q9C019 465 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 NR2E1Q9Y466 385 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 GATMP50440 423 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 ASTE1Q2TB18 679 aaPredicted RBP13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 USP45Q70EL2 814 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 IRGQQ8WZA9 623 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 HAUS8Q9BT25 410 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 ARHGEF4Q9NR80 690 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 HEY2Q9UBP5 337 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 E9PAM4 449 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 CTPS1P17812 591 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 AARSP49588 968 aaKnown RBP eCLIP13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 HIC1Q14526 733 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 ARMC6Q6NXE6 501 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 C16orf46Q6P387 395 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 PRPF39Q86UA1 669 aaKnown RBP13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 CIR1Q86X95 450 aaPredicted RBP13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 KIF2BQ8N4N8 673 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 TMEM159Q96B96 161 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 SUSD3Q96L08 255 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 CPNE1Q99829 537 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 YIPF2Q9BWQ6 316 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 R3HDMLQ9H3Y0 253 aa13.32□□□□□ -0.28
PTPRN2-202ENST00000389416 VGLL3A8MV65 326 aa13.31□□□□□ -0.28
PTPRN2-202ENST00000389416 CLDN11O75508 207 aa13.31□□□□□ -0.28
PTPRN2-202ENST00000389416 TCN1P20061 433 aaPredicted RBP13.31□□□□□ -0.28
PTPRN2-202ENST00000389416 ABCE1P61221 599 aaKnown RBP13.31□□□□□ -0.28
PTPRN2-202ENST00000389416 PTK2BQ14289 1009 aa13.31□□□□□ -0.28
PTPRN2-202ENST00000389416 CERS2Q96G23 380 aa13.31□□□□□ -0.28
PTPRN2-202ENST00000389416 FUBP3Q96I24 572 aaKnown RBP eCLIP13.31□□□□□ -0.286e-7■■■■■ 34.4
PTPRN2-202ENST00000389416 THTPAQ9BU02 230 aa13.31□□□□□ -0.28
PTPRN2-202ENST00000389416 ATP13A3Q9H7F0 1226 aa13.31□□□□□ -0.28
PTPRN2-202ENST00000389416 CPQQ9Y646 472 aa13.31□□□□□ -0.28
PTPRN2-202ENST00000389416 TOGARAM1Q9Y4F4 1720 aa13.31□□□□□ -0.28
PTPRN2-202ENST00000389416 KLHL2O95198 593 aa13.31□□□□□ -0.28
PTPRN2-202ENST00000389416 TACR2P21452 398 aa13.31□□□□□ -0.28
PTPRN2-202ENST00000389416 CDK18Q07002 472 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms