RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 TP53BP2Q13625 1128 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 PDK3Q15120 406 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 FAM45BPQ6NSW5 357 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 CLNKQ7Z7G1 428 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 FAM126BQ8IXS8 530 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 FBXW8Q8N3Y1 598 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 C12orf50Q8NA57 414 aaPredicted RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 ATG16L2Q8NAA4 619 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 FAM13CQ8NE31 585 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 WNT8BQ93098 351 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 NKD2Q969F2 451 aaPredicted RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 PHF21AQ96BD5 680 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 OTULINQ96BN8 352 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 PARVBQ9HBI1 364 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 POPDC2Q9HBU9 364 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 MID1IP1Q9NPA3 183 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 RGS18Q9NS28 235 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 SAE1Q9UBE0 346 aaPredicted RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 ENOPH1Q9UHY7 261 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 TNFSF13BQ9Y275 285 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 SH3BP1Q9Y3L3 701 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 NFASCO94856 1347 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 CCL15-CCL14A0A0B4J2E2 113 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 PNMA8CA0A1B0GUJ8 204 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 ASS1P00966 412 aaKnown RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 RXRGP48443 463 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 CCL15Q16663 113 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 SLC35G1Q2M3R5 365 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 ARMCX4Q5H9R4 360 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 PCID2Q5JVF3 399 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 TTC23Q5W5X9 447 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 STK32CQ86UX6 486 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 MIB1Q86YT6 1006 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 ZDHHC13Q8IUH4 622 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 FBXO16Q8IX29 292 aaPredicted RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 RORBQ92753 470 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 PTCD3Q96EY7 689 aaKnown RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 SEPHS2Q99611 448 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 ERVK-5Q9HDB9 667 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 SSU72Q9NP77 194 aaKnown RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 WDR70Q9NW82 654 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 DDX43Q9NXZ2 648 aaKnown RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 USE1Q9NZ43 259 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 MORF4L1Q9UBU8 362 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 LGALS13Q9UHV8 139 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 SNCAIPQ9Y6H5 919 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 TCRBV9S1A1TA0A576 114 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 PRRG1O14668 218 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 MT-CO1P00395 513 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 HOXC6P09630 235 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 MMP8P22894 467 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 PLIN5Q00G26 463 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 IL5RAQ01344 420 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 ECM1Q16610 540 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 OTUD3Q5T2D3 398 aaPredicted RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 TRAF7Q6Q0C0 670 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 ULK2Q8IYT8 1036 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 HS6ST3Q8IZP7 471 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 POP5Q969H6 163 aaKnown RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 APOL4Q9BPW4 351 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 OSBPL7Q9BZF2 842 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 CEP44Q9C0F1 390 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 FBXO44Q9H4M3 255 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 ELOVL6Q9H5J4 265 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 ACTR8Q9H981 624 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 LRRC4CQ9HCJ2 640 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 HMG20AQ9NP66 347 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 C1orf232A0A0U1RR37 186 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 FAM95CA0A1B0GW59 222 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 TRIM38O00635 465 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 GSC2O15499 205 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 SYNCRIPO60506 623 aaKnown RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 ARIH2O95376 493 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 GSNP06396 782 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 LBPP18428 481 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 CYP2B6P20813 491 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 NEK3P51956 506 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 TAS2R40P59535 323 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 RPL7AP62424 266 aaKnown RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 CNTN1Q12860 1018 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 CDH18Q13634 790 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 CYP2R1Q6VVX0 501 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 BHLHE22Q8NFJ8 381 aaPredicted RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 ACTRT2Q8TDY3 377 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 TBL1YQ9BQ87 522 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 SNRNP25Q9BV90 132 aaKnown RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 CEP41Q9BYV8 373 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 ST6GALNAC4Q9H4F1 302 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 SNTG2Q9NY99 539 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 SELENONQ9NZV5 590 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 SALL4Q9UJQ4 1053 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 VAV3Q9UKW4 847 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 COPG1Q9Y678 874 aaKnown RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 MKI67P46013 3256 aaKnown RBP8.52□□□□□ -1.05
VPS36-201ENST00000378060 SMCHD1A6NHR9 2005 aa8.52□□□□□ -1.05
VPS36-201ENST00000378060 SYNDIG1LA6NDD5 238 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 CCDC154A6NI56 674 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 H7C4K7 107 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 TRIM24O15164 1050 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms