RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 DCAF4Q8WV16 495 aa8.92□□□□□ -0.98
SMARCA1-203ENST00000371123 PSD2Q9BQI7 771 aa8.92□□□□□ -0.98
SMARCA1-203ENST00000371123 WDR55Q9H6Y2 383 aaPredicted RBP8.92□□□□□ -0.98
SMARCA1-203ENST00000371123 SMOXQ9NWM0 555 aa8.92□□□□□ -0.98
SMARCA1-203ENST00000371123 TBX20Q9UMR3 447 aa8.92□□□□□ -0.98
SMARCA1-203ENST00000371123 COQ4Q9Y3A0 265 aa8.92□□□□□ -0.98
SMARCA1-203ENST00000371123 ZNF638Q14966 1978 aaKnown RBP8.92□□□□□ -0.98
SMARCA1-203ENST00000371123 MGAMO43451 1857 aa8.92□□□□□ -0.98
SMARCA1-203ENST00000371123 AKAP10O43572 662 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 KRT38O76015 456 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 RFX1P22670 979 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 POLR2BP30876 1174 aaKnown RBP8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 AVPR1AP37288 418 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 NFATC3Q12968 1075 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 KLHL38Q2WGJ6 581 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 GALNT18Q6P9A2 607 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 DEFB132Q7Z7B7 95 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 IFNEQ86WN2 208 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 TFAP2CQ92754 450 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 EME1Q96AY2 570 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 WNK4Q96J92 1243 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 TSNARE1Q96NA8 513 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 TMEM79Q9BSE2 394 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 APOBEC3GQ9HC16 384 aaKnown RBP8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 GIN1Q9NXP7 522 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 SCHIP1Q9P0W5 487 aaPredicted RBP8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 PSAT1Q9Y617 370 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 COL11A2P13942 1736 aaPredicted RBP8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 CLOCKO15516 846 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 CCDC130P13994 396 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 PDGFRAP16234 1089 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 PTPN2P17706 415 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 HDCP19113 662 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 PHBP35232 272 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 IREB2P48200 963 aaKnown RBP8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 PRAMEP78395 509 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 C15orf59Q2T9L4 293 aaPredicted RBP8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 RFPL4BQ6ZWI9 263 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 CRLF3Q8IUI8 442 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 NDUFAF2Q8N183 169 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 GPD1LQ8N335 351 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 SPATA6LQ8N4H0 392 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 FAR2Q96K12 515 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 TDRD1Q9BXT4 1180 aaKnown RBP8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 SLC4A5Q9BY07 1137 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 EIF2AQ9BY44 585 aaKnown RBP8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 ANKRD60Q9BZ19 345 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 NDEL1Q9GZM8 345 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 COG4Q9H9E3 785 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 CXorf21Q9HAI6 301 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 MRPL47Q9HD33 250 aaKnown RBP8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 THAP1Q9NVV9 213 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 ARHGAP28Q9P2N2 729 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 PCDHA10Q9Y5I2 948 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 PSMD10O75832 226 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 MOCS2O96007 188 aaPredicted RBP8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 NCAM1P13591 858 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 NPR1P16066 1061 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 POLD2P49005 469 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 GPC3P51654 580 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 CSE1LP55060 971 aaKnown RBP8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 ARPP19P56211 112 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 NUP107P57740 925 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 CLCQ05315 142 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 PGS1Q32NB8 556 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 TKFCQ3LXA3 575 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 WDTC1Q8N5D0 677 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 OTUD5Q96G74 571 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 FBXL20Q96IG2 436 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 MROQ9BYG7 248 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 PIF1Q9H611 641 aa8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.91□□□□□ -0.98
SMARCA1-203ENST00000371123 MYO18AQ92614 2054 aaKnown RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 TMEM191CA6NGB0 347 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 PSMD11O00231 422 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 SOCS7O14512 581 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 BCAS2O75934 225 aaPredicted RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 BAIAP3O94812 1187 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 HPCAL1P37235 193 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 BCAR1P56945 870 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 FPGSQ05932 587 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 LRP8Q14114 963 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 DPYSL3Q14195 570 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 TBCCQ15814 346 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 PPP2R2DQ66LE6 453 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 PMF1Q6P1K2 205 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 EPGNQ6UW88 154 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 GALNT13Q8IUC8 556 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 RCN3Q96D15 328 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 RPL10LQ96L21 214 aaKnown RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 DRC3Q9H069 523 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 ATXN3LQ9H3M9 355 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 NRDE2Q9H7Z3 1164 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 TBC1D23Q9NUY8 699 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 PMF1-BGLAPU3KQ54 211 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 ARID1BQ8NFD5 2236 aaPredicted RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 BNIP3LO60238 219 aa8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 ENO3P13929 434 aaPredicted RBP8.9□□□□□ -0.98
SMARCA1-203ENST00000371123 TPH1P17752 444 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms