RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CORO1AP31146 461 aaKnown RBP12.34□□□□□ -0.43
USF1-203ENST00000368021 CHKAP35790 457 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 FDFT1P37268 417 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 MAPKAPK2P49137 400 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 WASHC5Q12768 1159 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 CBLBQ13191 982 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 KCNJ11Q14654 390 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 ANKRD20A2Q5SQ80 823 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 ANKRD20A1Q5TYW2 823 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 ANKRD20A3Q5VUR7 823 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 ARHGEF18Q6ZSZ5 1173 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 CCDC13Q8IYE1 715 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 LEMD2Q8NC56 503 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 LRRN4Q8WUT4 740 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 UBLCP1Q8WVY7 318 aaPredicted RBP12.34□□□□□ -0.43
USF1-203ENST00000368021 IGSF8Q969P0 613 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 RPRD1AQ96P16 312 aaPredicted RBP12.34□□□□□ -0.43
USF1-203ENST00000368021 RBM15Q96T37 977 aaKnown RBP eCLIP12.34□□□□□ -0.43
USF1-203ENST00000368021 DDX50Q9BQ39 737 aaKnown RBP12.34□□□□□ -0.43
USF1-203ENST00000368021 S1PR5Q9H228 398 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 ZNF212Q9UDV6 495 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 USP15Q9Y4E8 981 aaPredicted RBP12.34□□□□□ -0.43
USF1-203ENST00000368021 SOBPA7XYQ1 873 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 EIF3HO15372 352 aaKnown RBP eCLIP12.34□□□□□ -0.43
USF1-203ENST00000368021 CCL16O15467 120 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 KLKB1P03952 638 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 NUDT17P0C025 328 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 HOXB8P17481 243 aaPredicted RBP12.34□□□□□ -0.43
USF1-203ENST00000368021 DDX6P26196 483 aaKnown RBP eCLIP12.34□□□□□ -0.43
USF1-203ENST00000368021 SLC7A9P82251 487 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 SEMA5AQ13591 1074 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 ALFQ53S48 1182 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 TJAP1Q5JTD0 557 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 RABGAP1LQ5R372 815 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 ADGRF1Q5T601 910 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 TXNDC8Q6A555 127 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 CES5AQ6NT32 575 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 ELMSAN1Q6PJG2 1045 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 LRIG3Q6UXM1 1119 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 PPP1R21Q6ZMI0 780 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 CCDC25Q86WR0 208 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 DENND1CQ8IV53 801 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 HS6ST3Q8IZP7 471 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 ATPAF2Q8N5M1 289 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 NETO2Q8NC67 525 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 FATE1Q969F0 183 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 CELF6Q96J87 481 aaKnown RBP12.34□□□□□ -0.43
USF1-203ENST00000368021 ZIM3Q96PE6 472 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 RUFY1Q96T51 708 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 CORO1BQ9BR76 489 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 EPB41L4BQ9H329 900 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 SEMA4AQ9H3S1 761 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 ETNK1Q9HBU6 452 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 TRPC7Q9HCX4 862 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 GKN1Q9NS71 199 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 NDFIP2Q9NV92 336 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 ZDHHC7Q9NXF8 308 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 IGSF9Q9P2J2 1179 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 TRHDEQ9UKU6 1024 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 SRRM3A6NNA2 597 aaPredicted RBP12.33□□□□□ -0.44
USF1-203ENST00000368021 AGPSO00116 658 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 XYLBO75191 536 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 CNTN5O94779 1100 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 PTPN2P17706 415 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 TPSB2P20231 275 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 PTPN3P26045 913 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 ARL4CP56559 192 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 CDK16Q00536 496 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 TPSAB1Q15661 275 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 HIF1AQ16665 826 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 TEX44Q53QW1 395 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 ANKRD22Q5VYY1 191 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 TIGD7Q6NT04 549 aaPredicted RBP12.33□□□□□ -0.44
USF1-203ENST00000368021 CENPUQ71F23 418 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 ZNF567Q8N184 647 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 ARL14EPQ8N8R7 260 aaPredicted RBP12.33□□□□□ -0.44
USF1-203ENST00000368021 ZSCAN18Q8TBC5 510 aaPredicted RBP12.33□□□□□ -0.44
USF1-203ENST00000368021 SLC22A12Q96S37 553 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 CYP2S1Q96SQ9 504 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 SLC39A8Q9C0K1 460 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 ATXN3LQ9H3M9 355 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 CDC42EP4Q9H3Q1 356 aaKnown RBP12.33□□□□□ -0.44
USF1-203ENST00000368021 NOL6Q9H6R4 1146 aaKnown RBP12.33□□□□□ -0.44
USF1-203ENST00000368021 SFXN1Q9H9B4 322 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 DZANK1Q9NVP4 752 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 AGO1Q9UL18 857 aaKnown RBP12.33□□□□□ -0.44
USF1-203ENST00000368021 SHROOM3Q8TF72 1996 aa12.33□□□□□ -0.44
USF1-203ENST00000368021 TRAV19A0A0A6YYK7 116 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 GOLGA6L7A0A1B0GV03 622 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 E7ESA3 106 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 KCNK1O00180 336 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 DFFAO00273 331 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 RIPK2O43353 540 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 MAFKO60675 156 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 TMEM63AO94886 807 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 PAPLNO95428 1278 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 METTL18O95568 372 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 TTC4O95801 387 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 SLC6A4P31645 630 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 IRAK1P51617 712 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 241.9 ms