RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 DERAQ9Y315 318 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 TNPO3Q9Y5L0 923 aaKnown RBP17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 IFT172Q9UG01 1749 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 TCHHQ07283 1943 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 BANF1O75531 89 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 MTA2O94776 668 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 MLNP12872 115 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 RRM2P31350 389 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 HK2P52789 917 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 RDH11Q8TC12 318 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 MYRFQ9Y2G1 1151 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 PIK3C2AO00443 1686 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 TTLL13PA6NNM8 815 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 SERPINA6P08185 405 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 GABRB2P47870 512 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 AIF1P55008 147 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 IL2P60568 153 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 MRPS22P82650 360 aaKnown RBP17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 MON1BQ7L1V2 547 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 LPCAT2Q7L5N7 544 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 C12orf50Q8NA57 414 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 PANX3Q96QZ0 392 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 LGMNQ99538 433 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 RAP2CQ9Y3L5 183 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 MSH3P20585 1137 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 GPC1P35052 558 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 TMED10P49755 219 aaKnown RBP17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 SHROOM1Q2M3G4 852 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 PYDC1Q8WXC3 89 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 MBOAT7Q96N66 472 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 UGT2B28Q9BY64 529 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 CRYL1Q9Y2S2 319 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 AP3M1Q9Y2T2 418 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 ENTPD5O75356 428 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 NAA20P61599 178 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 OTUD3Q5T2D3 398 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 SDE2Q6IQ49 451 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 CYP2R1Q6VVX0 501 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 MILR1Q7Z6M3 343 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 C12orf29Q8N999 325 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 FAM84AQ96KN4 292 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 A0A1W2PPM1 405 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 RGSL1A5PLK6 1076 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 YDJCA8MPS7 323 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 CCDC166P0CW27 439 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 PTDSS1P48651 473 aaKnown RBP17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 MRPS5P82675 430 aaKnown RBP17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 NKAPQ8N5F7 415 aaKnown RBP17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 MAGED4Q96JG8 741 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 DHX33Q9H6R0 707 aaKnown RBP17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 COPG2Q9UBF2 871 aa17.34■□□□□ 0.37
TRAPPC11-201ENST00000334690 PIAS1O75925 651 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 CYP2A7P20853 494 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 RPL9P32969 192 aaKnown RBP17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 PKNOX1P55347 436 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 SLC25A3Q00325 362 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 CDC16Q13042 620 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 PPP1R26Q5T8A7 1209 aaPredicted RBP17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 LLGL2Q6P1M3 1020 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 GPSM1Q86YR5 675 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 DHRSXQ8N5I4 330 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 KLRG1Q96E93 195 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 CATSPERZQ9NTU4 200 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 RCOR3Q9P2K3 495 aaPredicted RBP17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 LRCH4O75427 683 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 KATNA1O75449 491 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 CABYRO75952 493 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 LRPAP1P30533 357 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 NEK3P51956 506 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 NCALDP61601 193 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 POTEHQ6S545 545 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 MCOLN3Q8TDD5 553 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 SLC44A1Q8WWI5 657 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 CPXM1Q96SM3 734 aa17.33■□□□□ 0.37
TRAPPC11-201ENST00000334690 SLC15A5A6NIM6 579 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 CPSF4O95639 269 aaKnown RBP17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 GUCA1CO95843 209 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 COX4I1P13073 169 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 EID3Q8N140 333 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 HGH1Q9BTY7 390 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 NIFKQ9BYG3 293 aaKnown RBP17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 TMEM245Q9H330 911 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 FAM124BQ9H5Z6 455 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 NUDT5Q9UKK9 219 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 FBXO5Q9UKT4 447 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 H3BMM5 538 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 ZNF862O60290 1169 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 SMIM10L2AP0DMW4 78 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 SMIM10L2BP0DMW5 78 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 PSEN1P49768 467 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 SLC44A4Q53GD3 710 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 BSNDQ8WZ55 320 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 RNF145Q96MT1 663 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 UROC1Q96N76 676 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 MRPL57Q9BQC6 102 aaKnown RBP17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 SMPD4Q9NXE4 827 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 PCDHGC3Q9UN70 934 aa17.33■□□□□ 0.36
TRAPPC11-201ENST00000334690 A0A087WXM4 84 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 CHI3L1P36222 383 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 QPCTQ16769 361 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms