RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 PLK1P53350 603 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 METAP1P53582 386 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 MYL5Q02045 173 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 CENPCQ03188 943 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 AUHQ13825 339 aaKnown RBP11.5□□□□□ -0.57
TARDBP-221ENST00000619555 MAN2A1Q16706 1144 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 ZSCAN23Q3MJ62 389 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 OR6B2Q6IFH4 312 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 CXorf57Q6NSI4 855 aaKnown RBP11.5□□□□□ -0.57
TARDBP-221ENST00000619555 DPY19L2P1Q6NXN4 242 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 C19orf48Q6RUI8 117 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 LRSAM1Q6UWE0 723 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.5□□□□□ -0.57
TARDBP-221ENST00000619555 GBP6Q6ZN66 633 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 FAM183BPQ6ZVS7 135 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 SND1Q7KZF4 910 aaKnown RBP eCLIP11.5□□□□□ -0.57
TARDBP-221ENST00000619555 C14orf80Q86SX3 495 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 GATAD2AQ86YP4 633 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 AOPEPQ8N6M6 819 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 OR52K2Q8NGK3 314 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 OR14C36Q8NHC7 312 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 FRS2Q8WU20 508 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 SHC3Q92529 594 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 ALG14Q96F25 216 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 TUBGCP2Q9BSJ2 902 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 AASDHPPTQ9NRN7 309 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 TAB2Q9NYJ8 693 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 APEX2Q9UBZ4 518 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 NYNRINQ9P2P1 1898 aaKnown RBP11.5□□□□□ -0.57
TARDBP-221ENST00000619555 ADAMTS20P59510 1910 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 A0A1B0GVM2 712 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 FAM149AA5PLN7 773 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 TCAF2A6NFQ2 919 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 HSF2BPO75031 334 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 ADH1BP00325 375 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 ERBB2P04626 1255 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 GLI1P08151 1106 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 PNMA6AP0CW24 399 aaPredicted RBP11.49□□□□□ -0.57
TARDBP-221ENST00000619555 SLC2A3P11169 496 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 PRKCSHP14314 528 aaPredicted RBP11.49□□□□□ -0.57
TARDBP-221ENST00000619555 ZNF18P17022 549 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 ABCB4P21439 1286 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 CCR1P32246 355 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 DRD3P35462 400 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 NNMTP40261 264 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 CCR5P51681 352 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 ADPRHP54922 357 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 PPP2CBP62714 309 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 PPP2CAP67775 309 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 SULT2A1Q06520 285 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 NME3Q13232 169 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 SLC12A1Q13621 1099 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 ELAVL3Q14576 367 aaKnown RBP11.49□□□□□ -0.57
TARDBP-221ENST00000619555 KRT31Q15323 416 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 SHBQ15464 509 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 EXOC3L4Q17RC7 722 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 VWA3BQ502W6 1294 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 EFHC1Q5JVL4 640 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 RABGAP1LQ5R372 815 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 APTXQ7Z2E3 356 aaKnown RBP11.49□□□□□ -0.57
TARDBP-221ENST00000619555 FAM114A1Q8IWE2 563 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 C1orf131Q8NDD1 294 aaKnown RBP11.49□□□□□ -0.57
TARDBP-221ENST00000619555 FAM81BQ96LP2 452 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 RPRD1AQ96P16 312 aaPredicted RBP11.49□□□□□ -0.57
TARDBP-221ENST00000619555 ELF4Q99607 663 aaPredicted RBP11.49□□□□□ -0.57
TARDBP-221ENST00000619555 NDST4Q9H3R1 872 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 SIX2Q9NPC8 291 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 ASNSD1Q9NWL6 643 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 SARDHQ9UL12 918 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 VANGL2Q9ULK5 521 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 PCDHGC3Q9UN70 934 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 HS3ST4Q9Y661 456 aa11.49□□□□□ -0.57
TARDBP-221ENST00000619555 IGSF10Q6WRI0 2623 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 TBC1D3DA0A087WVF3 549 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 TBC1D3IA0A087WXS9 549 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 TBC1D3EA0A087X179 549 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 TBC1D3KA0A087X1G2 549 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 TBC1D3FA6NER0 549 aaPredicted RBP11.48□□□□□ -0.57
TARDBP-221ENST00000619555 TRABD2BA6NFA1 517 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 TBC1D3LB9A6J9 549 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 CBX4O00257 560 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 FOXN3O00409 490 aaPredicted RBP11.48□□□□□ -0.57
TARDBP-221ENST00000619555 DFNA5O60443 496 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 RTN2O75298 545 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 PAGE1O75459 146 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 TBC1D3HP0C7X1 549 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 ATP1A3P13637 1013 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 EEF1GP26641 437 aaKnown RBP11.48□□□□□ -0.57
TARDBP-221ENST00000619555 CD38P28907 300 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 CLCN1P35523 988 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 SLC6A3Q01959 620 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 PTK2Q05397 1052 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 KCNMA1Q12791 1236 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 IQCB1Q15051 598 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 DLG2Q15700 870 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 POM121L1PQ3SYA9 428 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 ACCSLQ4AC99 568 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 PTPN20Q4JDL3 420 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 TTC39BQ5VTQ0 682 aaPredicted RBP11.48□□□□□ -0.57
TARDBP-221ENST00000619555 OTUD1Q5VV17 481 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms